Gene : Thecc1EG028581 T. cacao v1.1

Defline:  Uncharacterized protein (48%P) Genomic Order:  820
Name:  ? Thecc1EG028581 Secondary Identifier:  ? PAC:27437844

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028581 0.5kb upstream 0.5kb upstream 2766 true scaffold_6: 16504417-16507182 Theobroma cacao
Thecc1EG028581 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 16506683-16507182 Theobroma cacao
Thecc1EG028581 0.5kb downstream 0.5kb downstream 2766 true scaffold_6: 16503917-16506682 Theobroma cacao
Thecc1EG028581 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 16503917-16504416 Theobroma cacao
Thecc1EG028581 1.0kb upstream 1.0kb upstream 3266 true scaffold_6: 16504417-16507682 Theobroma cacao
Thecc1EG028581 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 16506683-16507682 Theobroma cacao
Thecc1EG028581 1.0kb downstream 1.0kb downstream 3266 true scaffold_6: 16503417-16506682 Theobroma cacao
Thecc1EG028581 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 16503417-16504416 Theobroma cacao
Thecc1EG028581 2.0kb upstream 2.0kb upstream 4266 true scaffold_6: 16504417-16508682 Theobroma cacao
Thecc1EG028581 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 16506683-16508682 Theobroma cacao
Thecc1EG028581 2.0kb downstream 2.0kb downstream 4266 true scaffold_6: 16502417-16506682 Theobroma cacao
Thecc1EG028581 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 16502417-16504416 Theobroma cacao
Thecc1EG028581 5.0kb upstream 5.0kb upstream 7266 true scaffold_6: 16504417-16511682 Theobroma cacao
Thecc1EG028581 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 16506683-16511682 Theobroma cacao
Thecc1EG028581 5.0kb downstream 5.0kb downstream 7266 true scaffold_6: 16499417-16506682 Theobroma cacao
Thecc1EG028581 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 16499417-16504416 Theobroma cacao
Thecc1EG028581 10.0kb upstream 10.0kb upstream 12266 true scaffold_6: 16504417-16516682 Theobroma cacao
Thecc1EG028581 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 16506683-16516682 Theobroma cacao
Thecc1EG028581 10.0kb downstream 10.0kb downstream 12266 true scaffold_6: 16494417-16506682 Theobroma cacao
Thecc1EG028581 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 16494417-16504416 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824742 5264 Brassicales-Malvales View MSA
124349464 5266 SBM View MSA
124246440 5268 Malvidae View MSA
124070919 5270 Rosid View MSA
123744437 5271 Pentapetalae View MSA
122795750 5272 Eudicot View MSA
122051586 5273 Angiosperm View MSA
121351518 5274 Embryophyte View MSA
123382201 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain