Gene : Thecc1EG028427 T. cacao v1.1

Defline:  (1 of 2) PTHR12505:SF19 - BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  772
Name:  ? Thecc1EG028427 Secondary Identifier:  ? PAC:27439313

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028427 0.5kb upstream 0.5kb upstream 7432 true scaffold_6: 14644024-14651455 Theobroma cacao
Thecc1EG028427 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14650956-14651455 Theobroma cacao
Thecc1EG028427 0.5kb downstream 0.5kb downstream 7432 true scaffold_6: 14643524-14650955 Theobroma cacao
Thecc1EG028427 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14643524-14644023 Theobroma cacao
Thecc1EG028427 1.0kb upstream 1.0kb upstream 7932 true scaffold_6: 14644024-14651955 Theobroma cacao
Thecc1EG028427 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14650956-14651955 Theobroma cacao
Thecc1EG028427 1.0kb downstream 1.0kb downstream 7932 true scaffold_6: 14643024-14650955 Theobroma cacao
Thecc1EG028427 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14643024-14644023 Theobroma cacao
Thecc1EG028427 2.0kb upstream 2.0kb upstream 8932 true scaffold_6: 14644024-14652955 Theobroma cacao
Thecc1EG028427 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14650956-14652955 Theobroma cacao
Thecc1EG028427 2.0kb downstream 2.0kb downstream 8932 true scaffold_6: 14642024-14650955 Theobroma cacao
Thecc1EG028427 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14642024-14644023 Theobroma cacao
Thecc1EG028427 5.0kb upstream 5.0kb upstream 11932 true scaffold_6: 14644024-14655955 Theobroma cacao
Thecc1EG028427 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14650956-14655955 Theobroma cacao
Thecc1EG028427 5.0kb downstream 5.0kb downstream 11932 true scaffold_6: 14639024-14650955 Theobroma cacao
Thecc1EG028427 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14639024-14644023 Theobroma cacao
Thecc1EG028427 10.0kb upstream 10.0kb upstream 16932 true scaffold_6: 14644024-14660955 Theobroma cacao
Thecc1EG028427 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14650956-14660955 Theobroma cacao
Thecc1EG028427 10.0kb downstream 10.0kb downstream 16932 true scaffold_6: 14634024-14650955 Theobroma cacao
Thecc1EG028427 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14634024-14644023 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041137 5273 Angiosperm View MSA
123834181 5264 Brassicales-Malvales View MSA
124321931 5266 SBM View MSA
124248013 5268 Malvidae View MSA
124072968 5270 Rosid View MSA
123739578 5271 Pentapetalae View MSA
122796902 5272 Eudicot View MSA
121346414 5274 Embryophyte View MSA
123380378 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain