Gene : Thecc1EG028441 T. cacao v1.1
Defline:  (1 of 1) PTHR33427//PTHR33427:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MQD17 Genomic Order:  780
Name:  ? Thecc1EG028441 Secondary Identifier:  ? PAC:27440736
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028441 0.5kb upstream 0.5kb upstream 4348 true scaffold_6: 14734404-14738751 Theobroma cacao
Thecc1EG028441 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 14738252-14738751 Theobroma cacao
Thecc1EG028441 0.5kb downstream 0.5kb downstream 4348 true scaffold_6: 14733904-14738251 Theobroma cacao
Thecc1EG028441 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 14733904-14734403 Theobroma cacao
Thecc1EG028441 1.0kb upstream 1.0kb upstream 4848 true scaffold_6: 14734404-14739251 Theobroma cacao
Thecc1EG028441 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 14738252-14739251 Theobroma cacao
Thecc1EG028441 1.0kb downstream 1.0kb downstream 4848 true scaffold_6: 14733404-14738251 Theobroma cacao
Thecc1EG028441 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 14733404-14734403 Theobroma cacao
Thecc1EG028441 2.0kb upstream 2.0kb upstream 5848 true scaffold_6: 14734404-14740251 Theobroma cacao
Thecc1EG028441 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 14738252-14740251 Theobroma cacao
Thecc1EG028441 2.0kb downstream 2.0kb downstream 5848 true scaffold_6: 14732404-14738251 Theobroma cacao
Thecc1EG028441 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 14732404-14734403 Theobroma cacao
Thecc1EG028441 5.0kb upstream 5.0kb upstream 8848 true scaffold_6: 14734404-14743251 Theobroma cacao
Thecc1EG028441 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 14738252-14743251 Theobroma cacao
Thecc1EG028441 5.0kb downstream 5.0kb downstream 8848 true scaffold_6: 14729404-14738251 Theobroma cacao
Thecc1EG028441 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 14729404-14734403 Theobroma cacao
Thecc1EG028441 10.0kb upstream 10.0kb upstream 13848 true scaffold_6: 14734404-14748251 Theobroma cacao
Thecc1EG028441 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 14738252-14748251 Theobroma cacao
Thecc1EG028441 10.0kb downstream 10.0kb downstream 13848 true scaffold_6: 14724404-14738251 Theobroma cacao
Thecc1EG028441 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 14724404-14734403 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840176 5264 Brassicales-Malvales View MSA
124341260 5266 SBM View MSA
124243288 5268 Malvidae View MSA
124074735 5270 Rosid View MSA
123746273 5271 Pentapetalae View MSA
122791628 5272 Eudicot View MSA
122044746 5273 Angiosperm View MSA
121349480 5274 Embryophyte View MSA
123381326 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain