Gene : Thecc1EG028870 T. cacao v1.1
Defline:  (1 of 26) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  984
Name:  ? Thecc1EG028870 Secondary Identifier:  ? PAC:27437789
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028870 0.5kb upstream 0.5kb upstream 1501 true scaffold_6: 18987439-18988939 Theobroma cacao
Thecc1EG028870 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 18987439-18987938 Theobroma cacao
Thecc1EG028870 0.5kb downstream 0.5kb downstream 1501 true scaffold_6: 18987939-18989439 Theobroma cacao
Thecc1EG028870 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 18988940-18989439 Theobroma cacao
Thecc1EG028870 1.0kb upstream 1.0kb upstream 2001 true scaffold_6: 18986939-18988939 Theobroma cacao
Thecc1EG028870 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 18986939-18987938 Theobroma cacao
Thecc1EG028870 1.0kb downstream 1.0kb downstream 2001 true scaffold_6: 18987939-18989939 Theobroma cacao
Thecc1EG028870 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 18988940-18989939 Theobroma cacao
Thecc1EG028870 2.0kb upstream 2.0kb upstream 3001 true scaffold_6: 18985939-18988939 Theobroma cacao
Thecc1EG028870 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 18985939-18987938 Theobroma cacao
Thecc1EG028870 2.0kb downstream 2.0kb downstream 3001 true scaffold_6: 18987939-18990939 Theobroma cacao
Thecc1EG028870 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 18988940-18990939 Theobroma cacao
Thecc1EG028870 5.0kb upstream 5.0kb upstream 6001 true scaffold_6: 18982939-18988939 Theobroma cacao
Thecc1EG028870 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 18982939-18987938 Theobroma cacao
Thecc1EG028870 5.0kb downstream 5.0kb downstream 6001 true scaffold_6: 18987939-18993939 Theobroma cacao
Thecc1EG028870 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 18988940-18993939 Theobroma cacao
Thecc1EG028870 10.0kb upstream 10.0kb upstream 11001 true scaffold_6: 18977939-18988939 Theobroma cacao
Thecc1EG028870 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 18977939-18987938 Theobroma cacao
Thecc1EG028870 10.0kb downstream 10.0kb downstream 11001 true scaffold_6: 18987939-18998939 Theobroma cacao
Thecc1EG028870 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 18988940-18998939 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840936 5264 Brassicales-Malvales View MSA
124348654 5266 SBM View MSA
124246073 5268 Malvidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain