Gene : Thecc1EG028859 T. cacao v1.1
Defline:  (1 of 1) K14313 - nuclear pore complex protein Nup53 (NUP35, NUP53) Genomic Order:  975
Name:  ? Thecc1EG028859 Secondary Identifier:  ? PAC:27438837
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028859 0.5kb upstream 0.5kb upstream 3906 true scaffold_6: 18914737-18918642 Theobroma cacao
Thecc1EG028859 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 18918143-18918642 Theobroma cacao
Thecc1EG028859 0.5kb downstream 0.5kb downstream 3906 true scaffold_6: 18914237-18918142 Theobroma cacao
Thecc1EG028859 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 18914237-18914736 Theobroma cacao
Thecc1EG028859 1.0kb upstream 1.0kb upstream 4406 true scaffold_6: 18914737-18919142 Theobroma cacao
Thecc1EG028859 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 18918143-18919142 Theobroma cacao
Thecc1EG028859 1.0kb downstream 1.0kb downstream 4406 true scaffold_6: 18913737-18918142 Theobroma cacao
Thecc1EG028859 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 18913737-18914736 Theobroma cacao
Thecc1EG028859 2.0kb upstream 2.0kb upstream 5406 true scaffold_6: 18914737-18920142 Theobroma cacao
Thecc1EG028859 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 18918143-18920142 Theobroma cacao
Thecc1EG028859 2.0kb downstream 2.0kb downstream 5406 true scaffold_6: 18912737-18918142 Theobroma cacao
Thecc1EG028859 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 18912737-18914736 Theobroma cacao
Thecc1EG028859 5.0kb upstream 5.0kb upstream 8406 true scaffold_6: 18914737-18923142 Theobroma cacao
Thecc1EG028859 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 18918143-18923142 Theobroma cacao
Thecc1EG028859 5.0kb downstream 5.0kb downstream 8406 true scaffold_6: 18909737-18918142 Theobroma cacao
Thecc1EG028859 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 18909737-18914736 Theobroma cacao
Thecc1EG028859 10.0kb upstream 10.0kb upstream 13406 true scaffold_6: 18914737-18928142 Theobroma cacao
Thecc1EG028859 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 18918143-18928142 Theobroma cacao
Thecc1EG028859 10.0kb downstream 10.0kb downstream 13406 true scaffold_6: 18904737-18918142 Theobroma cacao
Thecc1EG028859 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 18904737-18914736 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828677 5264 Brassicales-Malvales View MSA
124336744 5266 SBM View MSA
124238383 5268 Malvidae View MSA
124060694 5270 Rosid View MSA
123737479 5271 Pentapetalae View MSA
122787374 5272 Eudicot View MSA
122043882 5273 Angiosperm View MSA
121345576 5274 Embryophyte View MSA
123427693 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain