Gene : Thecc1EG029081 T. cacao v1.1
Defline:  (1 of 1) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1151
Name:  ? Thecc1EG029081 Secondary Identifier:  ? PAC:27438748
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5173 Theobroma cacao pathologic  
Tcacao PWY-5464 Theobroma cacao pathologic  
Tcacao PYRUVDEHYD-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029081 0.5kb upstream 0.5kb upstream 6622 true scaffold_6: 20523265-20529886 Theobroma cacao
Thecc1EG029081 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 20523265-20523764 Theobroma cacao
Thecc1EG029081 0.5kb downstream 0.5kb downstream 6622 true scaffold_6: 20523765-20530386 Theobroma cacao
Thecc1EG029081 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 20529887-20530386 Theobroma cacao
Thecc1EG029081 1.0kb upstream 1.0kb upstream 7122 true scaffold_6: 20522765-20529886 Theobroma cacao
Thecc1EG029081 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 20522765-20523764 Theobroma cacao
Thecc1EG029081 1.0kb downstream 1.0kb downstream 7122 true scaffold_6: 20523765-20530886 Theobroma cacao
Thecc1EG029081 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 20529887-20530886 Theobroma cacao
Thecc1EG029081 2.0kb upstream 2.0kb upstream 8122 true scaffold_6: 20521765-20529886 Theobroma cacao
Thecc1EG029081 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 20521765-20523764 Theobroma cacao
Thecc1EG029081 2.0kb downstream 2.0kb downstream 8122 true scaffold_6: 20523765-20531886 Theobroma cacao
Thecc1EG029081 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 20529887-20531886 Theobroma cacao
Thecc1EG029081 5.0kb upstream 5.0kb upstream 11122 true scaffold_6: 20518765-20529886 Theobroma cacao
Thecc1EG029081 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 20518765-20523764 Theobroma cacao
Thecc1EG029081 5.0kb downstream 5.0kb downstream 11122 true scaffold_6: 20523765-20534886 Theobroma cacao
Thecc1EG029081 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 20529887-20534886 Theobroma cacao
Thecc1EG029081 10.0kb upstream 10.0kb upstream 16122 true scaffold_6: 20513765-20529886 Theobroma cacao
Thecc1EG029081 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 20513765-20523764 Theobroma cacao
Thecc1EG029081 10.0kb downstream 10.0kb downstream 16122 true scaffold_6: 20523765-20539886 Theobroma cacao
Thecc1EG029081 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 20529887-20539886 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835606 5264 Brassicales-Malvales View MSA
124344538 5266 SBM View MSA
124243608 5268 Malvidae View MSA
124061053 5270 Rosid View MSA
123739083 5271 Pentapetalae View MSA
122788575 5272 Eudicot View MSA
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain