Gene : Thecc1EG029088 T. cacao v1.1
Defline:  (1 of 6) PTHR10052 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  1158
Name:  ? Thecc1EG029088 Secondary Identifier:  ? PAC:27440346
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029088 0.5kb upstream 0.5kb upstream 3238 true scaffold_6: 20553614-20556851 Theobroma cacao
Thecc1EG029088 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 20553614-20554113 Theobroma cacao
Thecc1EG029088 0.5kb downstream 0.5kb downstream 3238 true scaffold_6: 20554114-20557351 Theobroma cacao
Thecc1EG029088 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 20556852-20557351 Theobroma cacao
Thecc1EG029088 1.0kb upstream 1.0kb upstream 3738 true scaffold_6: 20553114-20556851 Theobroma cacao
Thecc1EG029088 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 20553114-20554113 Theobroma cacao
Thecc1EG029088 1.0kb downstream 1.0kb downstream 3738 true scaffold_6: 20554114-20557851 Theobroma cacao
Thecc1EG029088 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 20556852-20557851 Theobroma cacao
Thecc1EG029088 2.0kb upstream 2.0kb upstream 4738 true scaffold_6: 20552114-20556851 Theobroma cacao
Thecc1EG029088 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 20552114-20554113 Theobroma cacao
Thecc1EG029088 2.0kb downstream 2.0kb downstream 4738 true scaffold_6: 20554114-20558851 Theobroma cacao
Thecc1EG029088 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 20556852-20558851 Theobroma cacao
Thecc1EG029088 5.0kb upstream 5.0kb upstream 7738 true scaffold_6: 20549114-20556851 Theobroma cacao
Thecc1EG029088 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 20549114-20554113 Theobroma cacao
Thecc1EG029088 5.0kb downstream 5.0kb downstream 7738 true scaffold_6: 20554114-20561851 Theobroma cacao
Thecc1EG029088 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 20556852-20561851 Theobroma cacao
Thecc1EG029088 10.0kb upstream 10.0kb upstream 12738 true scaffold_6: 20544114-20556851 Theobroma cacao
Thecc1EG029088 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 20544114-20554113 Theobroma cacao
Thecc1EG029088 10.0kb downstream 10.0kb downstream 12738 true scaffold_6: 20554114-20566851 Theobroma cacao
Thecc1EG029088 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 20556852-20566851 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
123841516 5264 Brassicales-Malvales View MSA
124348801 5266 SBM View MSA
124247550 5268 Malvidae View MSA
124063459 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain