Gene : Thecc1EG029020 T. cacao v1.1
Defline:  (1 of 1) PTHR27001//PTHR27001:SF152 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMM17-RELATED Genomic Order:  1100
Name:  ? Thecc1EG029020 Secondary Identifier:  ? PAC:27440919
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029020 0.5kb upstream 0.5kb upstream 8623 true scaffold_6: 20045509-20054131 Theobroma cacao
Thecc1EG029020 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 20053632-20054131 Theobroma cacao
Thecc1EG029020 0.5kb downstream 0.5kb downstream 8623 true scaffold_6: 20045009-20053631 Theobroma cacao
Thecc1EG029020 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 20045009-20045508 Theobroma cacao
Thecc1EG029020 1.0kb upstream 1.0kb upstream 9123 true scaffold_6: 20045509-20054631 Theobroma cacao
Thecc1EG029020 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 20053632-20054631 Theobroma cacao
Thecc1EG029020 1.0kb downstream 1.0kb downstream 9123 true scaffold_6: 20044509-20053631 Theobroma cacao
Thecc1EG029020 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 20044509-20045508 Theobroma cacao
Thecc1EG029020 2.0kb upstream 2.0kb upstream 10123 true scaffold_6: 20045509-20055631 Theobroma cacao
Thecc1EG029020 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 20053632-20055631 Theobroma cacao
Thecc1EG029020 2.0kb downstream 2.0kb downstream 10123 true scaffold_6: 20043509-20053631 Theobroma cacao
Thecc1EG029020 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 20043509-20045508 Theobroma cacao
Thecc1EG029020 5.0kb upstream 5.0kb upstream 13123 true scaffold_6: 20045509-20058631 Theobroma cacao
Thecc1EG029020 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 20053632-20058631 Theobroma cacao
Thecc1EG029020 5.0kb downstream 5.0kb downstream 13123 true scaffold_6: 20040509-20053631 Theobroma cacao
Thecc1EG029020 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 20040509-20045508 Theobroma cacao
Thecc1EG029020 10.0kb upstream 10.0kb upstream 18123 true scaffold_6: 20045509-20063631 Theobroma cacao
Thecc1EG029020 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 20053632-20063631 Theobroma cacao
Thecc1EG029020 10.0kb downstream 10.0kb downstream 18123 true scaffold_6: 20035509-20053631 Theobroma cacao
Thecc1EG029020 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 20035509-20045508 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827408 5264 Brassicales-Malvales View MSA
124338903 5266 SBM View MSA
124237356 5268 Malvidae View MSA
124066375 5270 Rosid View MSA
123738565 5271 Pentapetalae View MSA
122788767 5272 Eudicot View MSA
122047607 5273 Angiosperm View MSA
121351058 5274 Embryophyte View MSA
123381993 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain