Gene : Thecc1EG028998 T. cacao v1.1
Defline:  (1 of 1) PF07303 - Occludin homology domain (Occludin_ELL) Genomic Order:  1079
Name:  ? Thecc1EG028998 Secondary Identifier:  ? PAC:27440964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028998 0.5kb upstream 0.5kb upstream 11182 true scaffold_6: 19895376-19906557 Theobroma cacao
Thecc1EG028998 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19906058-19906557 Theobroma cacao
Thecc1EG028998 0.5kb downstream 0.5kb downstream 11182 true scaffold_6: 19894876-19906057 Theobroma cacao
Thecc1EG028998 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19894876-19895375 Theobroma cacao
Thecc1EG028998 1.0kb upstream 1.0kb upstream 11682 true scaffold_6: 19895376-19907057 Theobroma cacao
Thecc1EG028998 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19906058-19907057 Theobroma cacao
Thecc1EG028998 1.0kb downstream 1.0kb downstream 11682 true scaffold_6: 19894376-19906057 Theobroma cacao
Thecc1EG028998 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19894376-19895375 Theobroma cacao
Thecc1EG028998 2.0kb upstream 2.0kb upstream 12682 true scaffold_6: 19895376-19908057 Theobroma cacao
Thecc1EG028998 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19906058-19908057 Theobroma cacao
Thecc1EG028998 2.0kb downstream 2.0kb downstream 12682 true scaffold_6: 19893376-19906057 Theobroma cacao
Thecc1EG028998 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19893376-19895375 Theobroma cacao
Thecc1EG028998 5.0kb upstream 5.0kb upstream 15682 true scaffold_6: 19895376-19911057 Theobroma cacao
Thecc1EG028998 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19906058-19911057 Theobroma cacao
Thecc1EG028998 5.0kb downstream 5.0kb downstream 15682 true scaffold_6: 19890376-19906057 Theobroma cacao
Thecc1EG028998 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19890376-19895375 Theobroma cacao
Thecc1EG028998 10.0kb upstream 10.0kb upstream 20682 true scaffold_6: 19895376-19916057 Theobroma cacao
Thecc1EG028998 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19906058-19916057 Theobroma cacao
Thecc1EG028998 10.0kb downstream 10.0kb downstream 20682 true scaffold_6: 19885376-19906057 Theobroma cacao
Thecc1EG028998 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19885376-19895375 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831791 5264 Brassicales-Malvales View MSA
124340432 5266 SBM View MSA
124238795 5268 Malvidae View MSA
124069075 5270 Rosid View MSA
123739076 5271 Pentapetalae View MSA
122788954 5272 Eudicot View MSA
122042901 5273 Angiosperm View MSA
121344929 5274 Embryophyte View MSA
123380129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain