Gene : Thecc1EG028983 T. cacao v1.1
Defline:  (1 of 1) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2) Genomic Order:  1065
Name:  ? Thecc1EG028983 Secondary Identifier:  ? PAC:27440300
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028983 0.5kb upstream 0.5kb upstream 1918 true scaffold_6: 19816820-19818737 Theobroma cacao
Thecc1EG028983 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19818238-19818737 Theobroma cacao
Thecc1EG028983 0.5kb downstream 0.5kb downstream 1918 true scaffold_6: 19816320-19818237 Theobroma cacao
Thecc1EG028983 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19816320-19816819 Theobroma cacao
Thecc1EG028983 1.0kb upstream 1.0kb upstream 2418 true scaffold_6: 19816820-19819237 Theobroma cacao
Thecc1EG028983 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19818238-19819237 Theobroma cacao
Thecc1EG028983 1.0kb downstream 1.0kb downstream 2418 true scaffold_6: 19815820-19818237 Theobroma cacao
Thecc1EG028983 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19815820-19816819 Theobroma cacao
Thecc1EG028983 2.0kb upstream 2.0kb upstream 3418 true scaffold_6: 19816820-19820237 Theobroma cacao
Thecc1EG028983 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19818238-19820237 Theobroma cacao
Thecc1EG028983 2.0kb downstream 2.0kb downstream 3418 true scaffold_6: 19814820-19818237 Theobroma cacao
Thecc1EG028983 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19814820-19816819 Theobroma cacao
Thecc1EG028983 5.0kb upstream 5.0kb upstream 6418 true scaffold_6: 19816820-19823237 Theobroma cacao
Thecc1EG028983 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19818238-19823237 Theobroma cacao
Thecc1EG028983 5.0kb downstream 5.0kb downstream 6418 true scaffold_6: 19811820-19818237 Theobroma cacao
Thecc1EG028983 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19811820-19816819 Theobroma cacao
Thecc1EG028983 10.0kb upstream 10.0kb upstream 11418 true scaffold_6: 19816820-19828237 Theobroma cacao
Thecc1EG028983 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19818238-19828237 Theobroma cacao
Thecc1EG028983 10.0kb downstream 10.0kb downstream 11418 true scaffold_6: 19806820-19818237 Theobroma cacao
Thecc1EG028983 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19806820-19816819 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831095 5264 Brassicales-Malvales View MSA
124341950 5266 SBM View MSA
124253428 5268 Malvidae View MSA
124063895 5270 Rosid View MSA
123748216 5271 Pentapetalae View MSA
122794716 5272 Eudicot View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain