Gene : Thecc1EG028967 T. cacao v1.1
Defline:  (1 of 2) PTHR31042:SF24 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1052
Name:  ? Thecc1EG028967 Secondary Identifier:  ? PAC:27439517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028967 0.5kb upstream 0.5kb upstream 4517 true scaffold_6: 19731717-19736233 Theobroma cacao
Thecc1EG028967 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19731717-19732216 Theobroma cacao
Thecc1EG028967 0.5kb downstream 0.5kb downstream 4517 true scaffold_6: 19732217-19736733 Theobroma cacao
Thecc1EG028967 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19736234-19736733 Theobroma cacao
Thecc1EG028967 1.0kb upstream 1.0kb upstream 5017 true scaffold_6: 19731217-19736233 Theobroma cacao
Thecc1EG028967 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19731217-19732216 Theobroma cacao
Thecc1EG028967 1.0kb downstream 1.0kb downstream 5017 true scaffold_6: 19732217-19737233 Theobroma cacao
Thecc1EG028967 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19736234-19737233 Theobroma cacao
Thecc1EG028967 2.0kb upstream 2.0kb upstream 6017 true scaffold_6: 19730217-19736233 Theobroma cacao
Thecc1EG028967 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19730217-19732216 Theobroma cacao
Thecc1EG028967 2.0kb downstream 2.0kb downstream 6017 true scaffold_6: 19732217-19738233 Theobroma cacao
Thecc1EG028967 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19736234-19738233 Theobroma cacao
Thecc1EG028967 5.0kb upstream 5.0kb upstream 9017 true scaffold_6: 19727217-19736233 Theobroma cacao
Thecc1EG028967 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19727217-19732216 Theobroma cacao
Thecc1EG028967 5.0kb downstream 5.0kb downstream 9017 true scaffold_6: 19732217-19741233 Theobroma cacao
Thecc1EG028967 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19736234-19741233 Theobroma cacao
Thecc1EG028967 10.0kb upstream 10.0kb upstream 14017 true scaffold_6: 19722217-19736233 Theobroma cacao
Thecc1EG028967 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19722217-19732216 Theobroma cacao
Thecc1EG028967 10.0kb downstream 10.0kb downstream 14017 true scaffold_6: 19732217-19746233 Theobroma cacao
Thecc1EG028967 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19736234-19746233 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041085 5273 Angiosperm View MSA
123824781 5264 Brassicales-Malvales View MSA
124320328 5266 SBM View MSA
124253305 5268 Malvidae View MSA
124070934 5270 Rosid View MSA
123745027 5271 Pentapetalae View MSA
122787278 5272 Eudicot View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain