Gene : Thecc1EG028979 T. cacao v1.1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF78 - NUCLEOPORIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1061
Name:  ? Thecc1EG028979 Secondary Identifier:  ? PAC:27438722
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028979 0.5kb upstream 0.5kb upstream 1306 true scaffold_6: 19793891-19795196 Theobroma cacao
Thecc1EG028979 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19794697-19795196 Theobroma cacao
Thecc1EG028979 0.5kb downstream 0.5kb downstream 1306 true scaffold_6: 19793391-19794696 Theobroma cacao
Thecc1EG028979 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19793391-19793890 Theobroma cacao
Thecc1EG028979 1.0kb upstream 1.0kb upstream 1806 true scaffold_6: 19793891-19795696 Theobroma cacao
Thecc1EG028979 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19794697-19795696 Theobroma cacao
Thecc1EG028979 1.0kb downstream 1.0kb downstream 1806 true scaffold_6: 19792891-19794696 Theobroma cacao
Thecc1EG028979 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19792891-19793890 Theobroma cacao
Thecc1EG028979 2.0kb upstream 2.0kb upstream 2806 true scaffold_6: 19793891-19796696 Theobroma cacao
Thecc1EG028979 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19794697-19796696 Theobroma cacao
Thecc1EG028979 2.0kb downstream 2.0kb downstream 2806 true scaffold_6: 19791891-19794696 Theobroma cacao
Thecc1EG028979 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19791891-19793890 Theobroma cacao
Thecc1EG028979 5.0kb upstream 5.0kb upstream 5806 true scaffold_6: 19793891-19799696 Theobroma cacao
Thecc1EG028979 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19794697-19799696 Theobroma cacao
Thecc1EG028979 5.0kb downstream 5.0kb downstream 5806 true scaffold_6: 19788891-19794696 Theobroma cacao
Thecc1EG028979 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19788891-19793890 Theobroma cacao
Thecc1EG028979 10.0kb upstream 10.0kb upstream 10806 true scaffold_6: 19793891-19804696 Theobroma cacao
Thecc1EG028979 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19794697-19804696 Theobroma cacao
Thecc1EG028979 10.0kb downstream 10.0kb downstream 10806 true scaffold_6: 19783891-19794696 Theobroma cacao
Thecc1EG028979 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19783891-19793890 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779389 5273 Angiosperm View MSA
123826006 5264 Brassicales-Malvales View MSA
124348869 5266 SBM View MSA
124249204 5268 Malvidae View MSA
124069736 5270 Rosid View MSA
123742633 5271 Pentapetalae View MSA
122770334 5272 Eudicot View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain