Gene : Thecc1EG028981 T. cacao v1.1
Defline:  (1 of 2) PTHR11014//PTHR11014:SF55 - PEPTIDASE M20 FAMILY MEMBER // IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  1063
Name:  ? Thecc1EG028981 Secondary Identifier:  ? PAC:27438786
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028981 0.5kb upstream 0.5kb upstream 6227 true scaffold_6: 19801347-19807573 Theobroma cacao
Thecc1EG028981 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19807074-19807573 Theobroma cacao
Thecc1EG028981 0.5kb downstream 0.5kb downstream 6227 true scaffold_6: 19800847-19807073 Theobroma cacao
Thecc1EG028981 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19800847-19801346 Theobroma cacao
Thecc1EG028981 1.0kb upstream 1.0kb upstream 6727 true scaffold_6: 19801347-19808073 Theobroma cacao
Thecc1EG028981 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19807074-19808073 Theobroma cacao
Thecc1EG028981 1.0kb downstream 1.0kb downstream 6727 true scaffold_6: 19800347-19807073 Theobroma cacao
Thecc1EG028981 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19800347-19801346 Theobroma cacao
Thecc1EG028981 2.0kb upstream 2.0kb upstream 7727 true scaffold_6: 19801347-19809073 Theobroma cacao
Thecc1EG028981 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19807074-19809073 Theobroma cacao
Thecc1EG028981 2.0kb downstream 2.0kb downstream 7727 true scaffold_6: 19799347-19807073 Theobroma cacao
Thecc1EG028981 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19799347-19801346 Theobroma cacao
Thecc1EG028981 5.0kb upstream 5.0kb upstream 10727 true scaffold_6: 19801347-19812073 Theobroma cacao
Thecc1EG028981 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19807074-19812073 Theobroma cacao
Thecc1EG028981 5.0kb downstream 5.0kb downstream 10727 true scaffold_6: 19796347-19807073 Theobroma cacao
Thecc1EG028981 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19796347-19801346 Theobroma cacao
Thecc1EG028981 10.0kb upstream 10.0kb upstream 15727 true scaffold_6: 19801347-19817073 Theobroma cacao
Thecc1EG028981 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19807074-19817073 Theobroma cacao
Thecc1EG028981 10.0kb downstream 10.0kb downstream 15727 true scaffold_6: 19791347-19807073 Theobroma cacao
Thecc1EG028981 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19791347-19801346 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830760 5264 Brassicales-Malvales View MSA
124337855 5266 SBM View MSA
124243641 5268 Malvidae View MSA
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain