Gene : Thecc1EG028964 T. cacao v1.1
Defline:  (1 of 11) PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  1049
Name:  ? Thecc1EG028964 Secondary Identifier:  ? PAC:27437988
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028964 0.5kb upstream 0.5kb upstream 3500 true scaffold_6: 19716397-19719896 Theobroma cacao
Thecc1EG028964 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19719397-19719896 Theobroma cacao
Thecc1EG028964 0.5kb downstream 0.5kb downstream 3500 true scaffold_6: 19715897-19719396 Theobroma cacao
Thecc1EG028964 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19715897-19716396 Theobroma cacao
Thecc1EG028964 1.0kb upstream 1.0kb upstream 4000 true scaffold_6: 19716397-19720396 Theobroma cacao
Thecc1EG028964 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19719397-19720396 Theobroma cacao
Thecc1EG028964 1.0kb downstream 1.0kb downstream 4000 true scaffold_6: 19715397-19719396 Theobroma cacao
Thecc1EG028964 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19715397-19716396 Theobroma cacao
Thecc1EG028964 2.0kb upstream 2.0kb upstream 5000 true scaffold_6: 19716397-19721396 Theobroma cacao
Thecc1EG028964 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19719397-19721396 Theobroma cacao
Thecc1EG028964 2.0kb downstream 2.0kb downstream 5000 true scaffold_6: 19714397-19719396 Theobroma cacao
Thecc1EG028964 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19714397-19716396 Theobroma cacao
Thecc1EG028964 5.0kb upstream 5.0kb upstream 8000 true scaffold_6: 19716397-19724396 Theobroma cacao
Thecc1EG028964 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19719397-19724396 Theobroma cacao
Thecc1EG028964 5.0kb downstream 5.0kb downstream 8000 true scaffold_6: 19711397-19719396 Theobroma cacao
Thecc1EG028964 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19711397-19716396 Theobroma cacao
Thecc1EG028964 10.0kb upstream 10.0kb upstream 13000 true scaffold_6: 19716397-19729396 Theobroma cacao
Thecc1EG028964 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19719397-19729396 Theobroma cacao
Thecc1EG028964 10.0kb downstream 10.0kb downstream 13000 true scaffold_6: 19706397-19719396 Theobroma cacao
Thecc1EG028964 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19706397-19716396 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842180 5264 Brassicales-Malvales View MSA
124347861 5266 SBM View MSA
124250704 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain