Gene : Thecc1EG028963 T. cacao v1.1
Defline:  (1 of 2) K12125 - protein EARLY FLOWERING 3 (ELF3) Genomic Order:  1048
Name:  ? Thecc1EG028963 Secondary Identifier:  ? PAC:27440818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028963 0.5kb upstream 0.5kb upstream 10688 true scaffold_6: 19705863-19716550 Theobroma cacao
Thecc1EG028963 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19705863-19706362 Theobroma cacao
Thecc1EG028963 0.5kb downstream 0.5kb downstream 10688 true scaffold_6: 19706363-19717050 Theobroma cacao
Thecc1EG028963 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19716551-19717050 Theobroma cacao
Thecc1EG028963 1.0kb upstream 1.0kb upstream 11188 true scaffold_6: 19705363-19716550 Theobroma cacao
Thecc1EG028963 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19705363-19706362 Theobroma cacao
Thecc1EG028963 1.0kb downstream 1.0kb downstream 11188 true scaffold_6: 19706363-19717550 Theobroma cacao
Thecc1EG028963 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19716551-19717550 Theobroma cacao
Thecc1EG028963 2.0kb upstream 2.0kb upstream 12188 true scaffold_6: 19704363-19716550 Theobroma cacao
Thecc1EG028963 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19704363-19706362 Theobroma cacao
Thecc1EG028963 2.0kb downstream 2.0kb downstream 12188 true scaffold_6: 19706363-19718550 Theobroma cacao
Thecc1EG028963 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19716551-19718550 Theobroma cacao
Thecc1EG028963 5.0kb upstream 5.0kb upstream 15188 true scaffold_6: 19701363-19716550 Theobroma cacao
Thecc1EG028963 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19701363-19706362 Theobroma cacao
Thecc1EG028963 5.0kb downstream 5.0kb downstream 15188 true scaffold_6: 19706363-19721550 Theobroma cacao
Thecc1EG028963 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19716551-19721550 Theobroma cacao
Thecc1EG028963 10.0kb upstream 10.0kb upstream 20188 true scaffold_6: 19696363-19716550 Theobroma cacao
Thecc1EG028963 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19696363-19706362 Theobroma cacao
Thecc1EG028963 10.0kb downstream 10.0kb downstream 20188 true scaffold_6: 19706363-19726550 Theobroma cacao
Thecc1EG028963 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19716551-19726550 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825523 5264 Brassicales-Malvales View MSA
124350619 5266 SBM View MSA
124246288 5268 Malvidae View MSA
124071157 5270 Rosid View MSA
123751825 5271 Pentapetalae View MSA
122796680 5272 Eudicot View MSA
122044272 5273 Angiosperm View MSA
121350755 5274 Embryophyte View MSA
123381878 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain