Gene : Thecc1EG028939 T. cacao v1.1
Defline:  (1 of 7) 1.13.99.1 - Inositol oxygenase / Myo-inositol oxygenase Genomic Order:  1031
Name:  ? Thecc1EG028939 Secondary Identifier:  ? PAC:27438554
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4841 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG028939 0.5kb upstream 0.5kb upstream 4124 true scaffold_6: 19543533-19547656 Theobroma cacao
Thecc1EG028939 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 19547157-19547656 Theobroma cacao
Thecc1EG028939 0.5kb downstream 0.5kb downstream 4124 true scaffold_6: 19543033-19547156 Theobroma cacao
Thecc1EG028939 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 19543033-19543532 Theobroma cacao
Thecc1EG028939 1.0kb upstream 1.0kb upstream 4624 true scaffold_6: 19543533-19548156 Theobroma cacao
Thecc1EG028939 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 19547157-19548156 Theobroma cacao
Thecc1EG028939 1.0kb downstream 1.0kb downstream 4624 true scaffold_6: 19542533-19547156 Theobroma cacao
Thecc1EG028939 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 19542533-19543532 Theobroma cacao
Thecc1EG028939 2.0kb upstream 2.0kb upstream 5624 true scaffold_6: 19543533-19549156 Theobroma cacao
Thecc1EG028939 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 19547157-19549156 Theobroma cacao
Thecc1EG028939 2.0kb downstream 2.0kb downstream 5624 true scaffold_6: 19541533-19547156 Theobroma cacao
Thecc1EG028939 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 19541533-19543532 Theobroma cacao
Thecc1EG028939 5.0kb upstream 5.0kb upstream 8624 true scaffold_6: 19543533-19552156 Theobroma cacao
Thecc1EG028939 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 19547157-19552156 Theobroma cacao
Thecc1EG028939 5.0kb downstream 5.0kb downstream 8624 true scaffold_6: 19538533-19547156 Theobroma cacao
Thecc1EG028939 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 19538533-19543532 Theobroma cacao
Thecc1EG028939 10.0kb upstream 10.0kb upstream 13624 true scaffold_6: 19543533-19557156 Theobroma cacao
Thecc1EG028939 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 19547157-19557156 Theobroma cacao
Thecc1EG028939 10.0kb downstream 10.0kb downstream 13624 true scaffold_6: 19533533-19547156 Theobroma cacao
Thecc1EG028939 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 19533533-19543532 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837433 5264 Brassicales-Malvales View MSA
124346950 5266 SBM View MSA
124240949 5268 Malvidae View MSA
124063382 5270 Rosid View MSA
123743695 5271 Pentapetalae View MSA
122796011 5272 Eudicot View MSA
122042225 5273 Angiosperm View MSA
121347706 5274 Embryophyte View MSA
123428319 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain