Gene : Thecc1EG029244 T. cacao v1.1
Defline:  (1 of 2) PTHR11353//PTHR11353:SF93 - CHAPERONIN // SUBFAMILY NOT NAMED Genomic Order:  1287
Name:  ? Thecc1EG029244 Secondary Identifier:  ? PAC:27439453
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6352 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029244 0.5kb upstream 0.5kb upstream 11685 true scaffold_6: 21506356-21518040 Theobroma cacao
Thecc1EG029244 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21506356-21506855 Theobroma cacao
Thecc1EG029244 0.5kb downstream 0.5kb downstream 11685 true scaffold_6: 21506856-21518540 Theobroma cacao
Thecc1EG029244 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21518041-21518540 Theobroma cacao
Thecc1EG029244 1.0kb upstream 1.0kb upstream 12185 true scaffold_6: 21505856-21518040 Theobroma cacao
Thecc1EG029244 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21505856-21506855 Theobroma cacao
Thecc1EG029244 1.0kb downstream 1.0kb downstream 12185 true scaffold_6: 21506856-21519040 Theobroma cacao
Thecc1EG029244 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21518041-21519040 Theobroma cacao
Thecc1EG029244 2.0kb upstream 2.0kb upstream 13185 true scaffold_6: 21504856-21518040 Theobroma cacao
Thecc1EG029244 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21504856-21506855 Theobroma cacao
Thecc1EG029244 2.0kb downstream 2.0kb downstream 13185 true scaffold_6: 21506856-21520040 Theobroma cacao
Thecc1EG029244 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21518041-21520040 Theobroma cacao
Thecc1EG029244 5.0kb upstream 5.0kb upstream 16185 true scaffold_6: 21501856-21518040 Theobroma cacao
Thecc1EG029244 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21501856-21506855 Theobroma cacao
Thecc1EG029244 5.0kb downstream 5.0kb downstream 16185 true scaffold_6: 21506856-21523040 Theobroma cacao
Thecc1EG029244 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21518041-21523040 Theobroma cacao
Thecc1EG029244 10.0kb upstream 10.0kb upstream 21185 true scaffold_6: 21496856-21518040 Theobroma cacao
Thecc1EG029244 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21496856-21506855 Theobroma cacao
Thecc1EG029244 10.0kb downstream 10.0kb downstream 21185 true scaffold_6: 21506856-21528040 Theobroma cacao
Thecc1EG029244 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21518041-21528040 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833424 5264 Brassicales-Malvales View MSA
124343385 5266 SBM View MSA
124251287 5268 Malvidae View MSA
124069910 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain