Gene : Thecc1EG029207 T. cacao v1.1
Defline:  (1 of 1) PTHR31008:SF3 - COP1-INTERACTING PROTEIN-RELATED PROTEIN-RELATED Genomic Order:  1256
Name:  ? Thecc1EG029207 Secondary Identifier:  ? PAC:27439579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029207 0.5kb upstream 0.5kb upstream 13987 true scaffold_6: 21308017-21322003 Theobroma cacao
Thecc1EG029207 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21321504-21322003 Theobroma cacao
Thecc1EG029207 0.5kb downstream 0.5kb downstream 13987 true scaffold_6: 21307517-21321503 Theobroma cacao
Thecc1EG029207 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21307517-21308016 Theobroma cacao
Thecc1EG029207 1.0kb upstream 1.0kb upstream 14487 true scaffold_6: 21308017-21322503 Theobroma cacao
Thecc1EG029207 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21321504-21322503 Theobroma cacao
Thecc1EG029207 1.0kb downstream 1.0kb downstream 14487 true scaffold_6: 21307017-21321503 Theobroma cacao
Thecc1EG029207 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21307017-21308016 Theobroma cacao
Thecc1EG029207 2.0kb upstream 2.0kb upstream 15487 true scaffold_6: 21308017-21323503 Theobroma cacao
Thecc1EG029207 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21321504-21323503 Theobroma cacao
Thecc1EG029207 2.0kb downstream 2.0kb downstream 15487 true scaffold_6: 21306017-21321503 Theobroma cacao
Thecc1EG029207 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21306017-21308016 Theobroma cacao
Thecc1EG029207 5.0kb upstream 5.0kb upstream 18487 true scaffold_6: 21308017-21326503 Theobroma cacao
Thecc1EG029207 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21321504-21326503 Theobroma cacao
Thecc1EG029207 5.0kb downstream 5.0kb downstream 18487 true scaffold_6: 21303017-21321503 Theobroma cacao
Thecc1EG029207 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21303017-21308016 Theobroma cacao
Thecc1EG029207 10.0kb upstream 10.0kb upstream 23487 true scaffold_6: 21308017-21331503 Theobroma cacao
Thecc1EG029207 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21321504-21331503 Theobroma cacao
Thecc1EG029207 10.0kb downstream 10.0kb downstream 23487 true scaffold_6: 21298017-21321503 Theobroma cacao
Thecc1EG029207 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21298017-21308016 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841431 5264 Brassicales-Malvales View MSA
124339053 5266 SBM View MSA
124251623 5268 Malvidae View MSA
124070250 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain