Gene : Thecc1EG029183 T. cacao v1.1
Defline:  (1 of 1) PTHR23155//PTHR23155:SF513//PTHR23155:SF634 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED Genomic Order:  1237
Name:  ? Thecc1EG029183 Secondary Identifier:  ? PAC:27438187
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029183 0.5kb upstream 0.5kb upstream 10811 true scaffold_6: 21154216-21165026 Theobroma cacao
Thecc1EG029183 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21164527-21165026 Theobroma cacao
Thecc1EG029183 0.5kb downstream 0.5kb downstream 10811 true scaffold_6: 21153716-21164526 Theobroma cacao
Thecc1EG029183 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21153716-21154215 Theobroma cacao
Thecc1EG029183 1.0kb upstream 1.0kb upstream 11311 true scaffold_6: 21154216-21165526 Theobroma cacao
Thecc1EG029183 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21164527-21165526 Theobroma cacao
Thecc1EG029183 1.0kb downstream 1.0kb downstream 11311 true scaffold_6: 21153216-21164526 Theobroma cacao
Thecc1EG029183 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21153216-21154215 Theobroma cacao
Thecc1EG029183 2.0kb upstream 2.0kb upstream 12311 true scaffold_6: 21154216-21166526 Theobroma cacao
Thecc1EG029183 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21164527-21166526 Theobroma cacao
Thecc1EG029183 2.0kb downstream 2.0kb downstream 12311 true scaffold_6: 21152216-21164526 Theobroma cacao
Thecc1EG029183 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21152216-21154215 Theobroma cacao
Thecc1EG029183 5.0kb upstream 5.0kb upstream 15311 true scaffold_6: 21154216-21169526 Theobroma cacao
Thecc1EG029183 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21164527-21169526 Theobroma cacao
Thecc1EG029183 5.0kb downstream 5.0kb downstream 15311 true scaffold_6: 21149216-21164526 Theobroma cacao
Thecc1EG029183 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21149216-21154215 Theobroma cacao
Thecc1EG029183 10.0kb upstream 10.0kb upstream 20311 true scaffold_6: 21154216-21174526 Theobroma cacao
Thecc1EG029183 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21164527-21174526 Theobroma cacao
Thecc1EG029183 10.0kb downstream 10.0kb downstream 20311 true scaffold_6: 21144216-21164526 Theobroma cacao
Thecc1EG029183 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21144216-21154215 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841874 5264 Brassicales-Malvales View MSA
124350995 5266 SBM View MSA
124253634 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain