Gene : Thecc1EG029165 T. cacao v1.1
Defline:  (1 of 5) K00940 - nucleoside-diphosphate kinase (ndk, NME) Genomic Order:  1224
Name:  ? Thecc1EG029165 Secondary Identifier:  ? PAC:27438968
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Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-162 Theobroma cacao pathologic  
Tcacao PWY-6126 Theobroma cacao pathologic  
Tcacao PWY-6545 Theobroma cacao pathologic  
Tcacao PWY-7176 Theobroma cacao pathologic  
Tcacao PWY-7184 Theobroma cacao pathologic  
Tcacao PWY-7196 Theobroma cacao pathologic  
Tcacao PWY-7197 Theobroma cacao pathologic  
Tcacao PWY-7200 Theobroma cacao pathologic  
Tcacao PWY-7205 Theobroma cacao pathologic  
Tcacao PWY-7208 Theobroma cacao pathologic  
Tcacao PWY-7210 Theobroma cacao pathologic  
Tcacao PWY-7211 Theobroma cacao pathologic  
Tcacao PWY-7220 Theobroma cacao pathologic  
Tcacao PWY-7221 Theobroma cacao pathologic  
Tcacao PWY-7222 Theobroma cacao pathologic  
Tcacao PWY-7224 Theobroma cacao pathologic  
Tcacao PWY-7226 Theobroma cacao pathologic  
Tcacao PWY-7227 Theobroma cacao pathologic  
Tcacao PWY-7228 Theobroma cacao pathologic  
Tcacao PWY-7229 Theobroma cacao pathologic  
Tcacao PWY-841 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029165 0.5kb upstream 0.5kb upstream 3231 true scaffold_6: 21064116-21067346 Theobroma cacao
Thecc1EG029165 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21064116-21064615 Theobroma cacao
Thecc1EG029165 0.5kb downstream 0.5kb downstream 3231 true scaffold_6: 21064616-21067846 Theobroma cacao
Thecc1EG029165 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21067347-21067846 Theobroma cacao
Thecc1EG029165 1.0kb upstream 1.0kb upstream 3731 true scaffold_6: 21063616-21067346 Theobroma cacao
Thecc1EG029165 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21063616-21064615 Theobroma cacao
Thecc1EG029165 1.0kb downstream 1.0kb downstream 3731 true scaffold_6: 21064616-21068346 Theobroma cacao
Thecc1EG029165 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21067347-21068346 Theobroma cacao
Thecc1EG029165 2.0kb upstream 2.0kb upstream 4731 true scaffold_6: 21062616-21067346 Theobroma cacao
Thecc1EG029165 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21062616-21064615 Theobroma cacao
Thecc1EG029165 2.0kb downstream 2.0kb downstream 4731 true scaffold_6: 21064616-21069346 Theobroma cacao
Thecc1EG029165 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21067347-21069346 Theobroma cacao
Thecc1EG029165 5.0kb upstream 5.0kb upstream 7731 true scaffold_6: 21059616-21067346 Theobroma cacao
Thecc1EG029165 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21059616-21064615 Theobroma cacao
Thecc1EG029165 5.0kb downstream 5.0kb downstream 7731 true scaffold_6: 21064616-21072346 Theobroma cacao
Thecc1EG029165 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21067347-21072346 Theobroma cacao
Thecc1EG029165 10.0kb upstream 10.0kb upstream 12731 true scaffold_6: 21054616-21067346 Theobroma cacao
Thecc1EG029165 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21054616-21064615 Theobroma cacao
Thecc1EG029165 10.0kb downstream 10.0kb downstream 12731 true scaffold_6: 21064616-21077346 Theobroma cacao
Thecc1EG029165 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21067347-21077346 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828105 5264 Brassicales-Malvales View MSA
124343949 5266 SBM View MSA
124246800 5268 Malvidae View MSA
124064787 5270 Rosid View MSA
123750208 5271 Pentapetalae View MSA
122791654 5272 Eudicot View MSA
122046358 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121348725 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain