Gene : Thecc1EG029140 T. cacao v1.1

Defline:  (1 of 1) K03133 - transcription initiation factor TFIID subunit 9B (TAF9B, TAF9) Genomic Order:  1205
Name:  ? Thecc1EG029140 Secondary Identifier:  ? PAC:27437943

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029140 0.5kb upstream 0.5kb upstream 2155 true scaffold_6: 20880445-20882599 Theobroma cacao
Thecc1EG029140 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 20880445-20880944 Theobroma cacao
Thecc1EG029140 0.5kb downstream 0.5kb downstream 2155 true scaffold_6: 20880945-20883099 Theobroma cacao
Thecc1EG029140 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 20882600-20883099 Theobroma cacao
Thecc1EG029140 1.0kb upstream 1.0kb upstream 2655 true scaffold_6: 20879945-20882599 Theobroma cacao
Thecc1EG029140 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 20879945-20880944 Theobroma cacao
Thecc1EG029140 1.0kb downstream 1.0kb downstream 2655 true scaffold_6: 20880945-20883599 Theobroma cacao
Thecc1EG029140 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 20882600-20883599 Theobroma cacao
Thecc1EG029140 2.0kb upstream 2.0kb upstream 3655 true scaffold_6: 20878945-20882599 Theobroma cacao
Thecc1EG029140 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 20878945-20880944 Theobroma cacao
Thecc1EG029140 2.0kb downstream 2.0kb downstream 3655 true scaffold_6: 20880945-20884599 Theobroma cacao
Thecc1EG029140 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 20882600-20884599 Theobroma cacao
Thecc1EG029140 5.0kb upstream 5.0kb upstream 6655 true scaffold_6: 20875945-20882599 Theobroma cacao
Thecc1EG029140 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 20875945-20880944 Theobroma cacao
Thecc1EG029140 5.0kb downstream 5.0kb downstream 6655 true scaffold_6: 20880945-20887599 Theobroma cacao
Thecc1EG029140 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 20882600-20887599 Theobroma cacao
Thecc1EG029140 10.0kb upstream 10.0kb upstream 11655 true scaffold_6: 20870945-20882599 Theobroma cacao
Thecc1EG029140 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 20870945-20880944 Theobroma cacao
Thecc1EG029140 10.0kb downstream 10.0kb downstream 11655 true scaffold_6: 20880945-20892599 Theobroma cacao
Thecc1EG029140 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 20882600-20892599 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832358 5264 Brassicales-Malvales View MSA
124349417 5266 SBM View MSA
124242988 5268 Malvidae View MSA
124067490 5270 Rosid View MSA
123736681 5271 Pentapetalae View MSA
122786173 5272 Eudicot View MSA
122043931 5273 Angiosperm View MSA
121344953 5274 Embryophyte View MSA
123428826 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain