Gene : Thecc1EG029138 T. cacao v1.1
Defline:  (1 of 1) PTHR10992:SF828 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  1203
Name:  ? Thecc1EG029138 Secondary Identifier:  ? PAC:27440720
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  
Tcacao PWY-7420 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029138 0.5kb upstream 0.5kb upstream 2333 true scaffold_6: 20874232-20876564 Theobroma cacao
Thecc1EG029138 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 20876065-20876564 Theobroma cacao
Thecc1EG029138 0.5kb downstream 0.5kb downstream 2333 true scaffold_6: 20873732-20876064 Theobroma cacao
Thecc1EG029138 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 20873732-20874231 Theobroma cacao
Thecc1EG029138 1.0kb upstream 1.0kb upstream 2833 true scaffold_6: 20874232-20877064 Theobroma cacao
Thecc1EG029138 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 20876065-20877064 Theobroma cacao
Thecc1EG029138 1.0kb downstream 1.0kb downstream 2833 true scaffold_6: 20873232-20876064 Theobroma cacao
Thecc1EG029138 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 20873232-20874231 Theobroma cacao
Thecc1EG029138 2.0kb upstream 2.0kb upstream 3833 true scaffold_6: 20874232-20878064 Theobroma cacao
Thecc1EG029138 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 20876065-20878064 Theobroma cacao
Thecc1EG029138 2.0kb downstream 2.0kb downstream 3833 true scaffold_6: 20872232-20876064 Theobroma cacao
Thecc1EG029138 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 20872232-20874231 Theobroma cacao
Thecc1EG029138 5.0kb upstream 5.0kb upstream 6833 true scaffold_6: 20874232-20881064 Theobroma cacao
Thecc1EG029138 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 20876065-20881064 Theobroma cacao
Thecc1EG029138 5.0kb downstream 5.0kb downstream 6833 true scaffold_6: 20869232-20876064 Theobroma cacao
Thecc1EG029138 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 20869232-20874231 Theobroma cacao
Thecc1EG029138 10.0kb upstream 10.0kb upstream 11833 true scaffold_6: 20874232-20886064 Theobroma cacao
Thecc1EG029138 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 20876065-20886064 Theobroma cacao
Thecc1EG029138 10.0kb downstream 10.0kb downstream 11833 true scaffold_6: 20864232-20876064 Theobroma cacao
Thecc1EG029138 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 20864232-20874231 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026796 5273 Angiosperm View MSA
123837181 5264 Brassicales-Malvales View MSA
124344749 5266 SBM View MSA
124244289 5268 Malvidae View MSA
124064864 5270 Rosid View MSA
123739355 5271 Pentapetalae View MSA
122769951 5272 Eudicot View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain