Gene : Thecc1EG029096 T. cacao v1.1
Defline:  (1 of 2) 4.2.3.1 - Threonine synthase Genomic Order:  1165
Name:  ? Thecc1EG029096 Secondary Identifier:  ? PAC:27437729
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao HOMOSER-THRESYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3001 Theobroma cacao pathologic  
Tcacao PWY-724 Theobroma cacao pathologic  
Tcacao THRESYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029096 0.5kb upstream 0.5kb upstream 5257 true scaffold_6: 20583362-20588618 Theobroma cacao
Thecc1EG029096 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 20588119-20588618 Theobroma cacao
Thecc1EG029096 0.5kb downstream 0.5kb downstream 5257 true scaffold_6: 20582862-20588118 Theobroma cacao
Thecc1EG029096 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 20582862-20583361 Theobroma cacao
Thecc1EG029096 1.0kb upstream 1.0kb upstream 5757 true scaffold_6: 20583362-20589118 Theobroma cacao
Thecc1EG029096 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 20588119-20589118 Theobroma cacao
Thecc1EG029096 1.0kb downstream 1.0kb downstream 5757 true scaffold_6: 20582362-20588118 Theobroma cacao
Thecc1EG029096 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 20582362-20583361 Theobroma cacao
Thecc1EG029096 2.0kb upstream 2.0kb upstream 6757 true scaffold_6: 20583362-20590118 Theobroma cacao
Thecc1EG029096 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 20588119-20590118 Theobroma cacao
Thecc1EG029096 2.0kb downstream 2.0kb downstream 6757 true scaffold_6: 20581362-20588118 Theobroma cacao
Thecc1EG029096 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 20581362-20583361 Theobroma cacao
Thecc1EG029096 5.0kb upstream 5.0kb upstream 9757 true scaffold_6: 20583362-20593118 Theobroma cacao
Thecc1EG029096 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 20588119-20593118 Theobroma cacao
Thecc1EG029096 5.0kb downstream 5.0kb downstream 9757 true scaffold_6: 20578362-20588118 Theobroma cacao
Thecc1EG029096 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 20578362-20583361 Theobroma cacao
Thecc1EG029096 10.0kb upstream 10.0kb upstream 14757 true scaffold_6: 20583362-20598118 Theobroma cacao
Thecc1EG029096 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 20588119-20598118 Theobroma cacao
Thecc1EG029096 10.0kb downstream 10.0kb downstream 14757 true scaffold_6: 20573362-20588118 Theobroma cacao
Thecc1EG029096 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 20573362-20583361 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041159 5273 Angiosperm View MSA
123820902 5264 Brassicales-Malvales Singleton cluster - no MSA
124317099 5266 SBM Singleton cluster - no MSA
124255293 5268 Malvidae View MSA
124069376 5270 Rosid View MSA
123748441 5271 Pentapetalae View MSA
122786729 5272 Eudicot View MSA
121349368 5274 Embryophyte View MSA
123424940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain