Gene : Thecc1EG029407 T. cacao v1.1
Defline:  (1 of 1) PTHR11214//PTHR11214:SF92 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 20-RELATED Genomic Order:  1418
Name:  ? Thecc1EG029407 Secondary Identifier:  ? PAC:27439435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029407 0.5kb upstream 0.5kb upstream 5654 true scaffold_6: 22455435-22461088 Theobroma cacao
Thecc1EG029407 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 22460589-22461088 Theobroma cacao
Thecc1EG029407 0.5kb downstream 0.5kb downstream 5654 true scaffold_6: 22454935-22460588 Theobroma cacao
Thecc1EG029407 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22454935-22455434 Theobroma cacao
Thecc1EG029407 1.0kb upstream 1.0kb upstream 6154 true scaffold_6: 22455435-22461588 Theobroma cacao
Thecc1EG029407 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 22460589-22461588 Theobroma cacao
Thecc1EG029407 1.0kb downstream 1.0kb downstream 6154 true scaffold_6: 22454435-22460588 Theobroma cacao
Thecc1EG029407 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22454435-22455434 Theobroma cacao
Thecc1EG029407 2.0kb upstream 2.0kb upstream 7154 true scaffold_6: 22455435-22462588 Theobroma cacao
Thecc1EG029407 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 22460589-22462588 Theobroma cacao
Thecc1EG029407 2.0kb downstream 2.0kb downstream 7154 true scaffold_6: 22453435-22460588 Theobroma cacao
Thecc1EG029407 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22453435-22455434 Theobroma cacao
Thecc1EG029407 5.0kb upstream 5.0kb upstream 10154 true scaffold_6: 22455435-22465588 Theobroma cacao
Thecc1EG029407 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 22460589-22465588 Theobroma cacao
Thecc1EG029407 5.0kb downstream 5.0kb downstream 10154 true scaffold_6: 22450435-22460588 Theobroma cacao
Thecc1EG029407 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22450435-22455434 Theobroma cacao
Thecc1EG029407 10.0kb upstream 10.0kb upstream 15154 true scaffold_6: 22455435-22470588 Theobroma cacao
Thecc1EG029407 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 22460589-22470588 Theobroma cacao
Thecc1EG029407 10.0kb downstream 10.0kb downstream 15154 true scaffold_6: 22445435-22460588 Theobroma cacao
Thecc1EG029407 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22445435-22455434 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833678 5264 Brassicales-Malvales View MSA
124337033 5266 SBM View MSA
124245371 5268 Malvidae View MSA
124064746 5270 Rosid View MSA
123750268 5271 Pentapetalae View MSA
122792852 5272 Eudicot View MSA
122049644 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain