Gene : Thecc1EG029400 T. cacao v1.1
Defline:  (1 of 1) K02726 - 20S proteasome subunit alpha 2 (PSMA2) Genomic Order:  1411
Name:  ? Thecc1EG029400 Secondary Identifier:  ? PAC:27440899
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029400 0.5kb upstream 0.5kb upstream 5010 true scaffold_6: 22421362-22426371 Theobroma cacao
Thecc1EG029400 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 22421362-22421861 Theobroma cacao
Thecc1EG029400 0.5kb downstream 0.5kb downstream 5010 true scaffold_6: 22421862-22426871 Theobroma cacao
Thecc1EG029400 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22426372-22426871 Theobroma cacao
Thecc1EG029400 1.0kb upstream 1.0kb upstream 5510 true scaffold_6: 22420862-22426371 Theobroma cacao
Thecc1EG029400 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 22420862-22421861 Theobroma cacao
Thecc1EG029400 1.0kb downstream 1.0kb downstream 5510 true scaffold_6: 22421862-22427371 Theobroma cacao
Thecc1EG029400 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22426372-22427371 Theobroma cacao
Thecc1EG029400 2.0kb upstream 2.0kb upstream 6510 true scaffold_6: 22419862-22426371 Theobroma cacao
Thecc1EG029400 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 22419862-22421861 Theobroma cacao
Thecc1EG029400 2.0kb downstream 2.0kb downstream 6510 true scaffold_6: 22421862-22428371 Theobroma cacao
Thecc1EG029400 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22426372-22428371 Theobroma cacao
Thecc1EG029400 5.0kb upstream 5.0kb upstream 9510 true scaffold_6: 22416862-22426371 Theobroma cacao
Thecc1EG029400 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 22416862-22421861 Theobroma cacao
Thecc1EG029400 5.0kb downstream 5.0kb downstream 9510 true scaffold_6: 22421862-22431371 Theobroma cacao
Thecc1EG029400 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22426372-22431371 Theobroma cacao
Thecc1EG029400 10.0kb upstream 10.0kb upstream 14510 true scaffold_6: 22411862-22426371 Theobroma cacao
Thecc1EG029400 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 22411862-22421861 Theobroma cacao
Thecc1EG029400 10.0kb downstream 10.0kb downstream 14510 true scaffold_6: 22421862-22436371 Theobroma cacao
Thecc1EG029400 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22426372-22436371 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026291 5273 Angiosperm View MSA
123841015 5264 Brassicales-Malvales View MSA
124350463 5266 SBM View MSA
124241127 5268 Malvidae View MSA
124069190 5270 Rosid View MSA
123746972 5271 Pentapetalae View MSA
122795211 5272 Eudicot View MSA
121350421 5274 Embryophyte View MSA
123426464 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain