Gene : Thecc1EG029404 T. cacao v1.1
Defline:  (1 of 1) PTHR13018:SF22 - EARLY-RESPONSIVE TO DEHYDRATION STRESS PROTEIN (ERD4) Genomic Order:  1415
Name:  ? Thecc1EG029404 Secondary Identifier:  ? PAC:27440053
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029404 0.5kb upstream 0.5kb upstream 6247 true scaffold_6: 22441941-22448187 Theobroma cacao
Thecc1EG029404 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 22447688-22448187 Theobroma cacao
Thecc1EG029404 0.5kb downstream 0.5kb downstream 6247 true scaffold_6: 22441441-22447687 Theobroma cacao
Thecc1EG029404 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22441441-22441940 Theobroma cacao
Thecc1EG029404 1.0kb upstream 1.0kb upstream 6747 true scaffold_6: 22441941-22448687 Theobroma cacao
Thecc1EG029404 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 22447688-22448687 Theobroma cacao
Thecc1EG029404 1.0kb downstream 1.0kb downstream 6747 true scaffold_6: 22440941-22447687 Theobroma cacao
Thecc1EG029404 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22440941-22441940 Theobroma cacao
Thecc1EG029404 2.0kb upstream 2.0kb upstream 7747 true scaffold_6: 22441941-22449687 Theobroma cacao
Thecc1EG029404 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 22447688-22449687 Theobroma cacao
Thecc1EG029404 2.0kb downstream 2.0kb downstream 7747 true scaffold_6: 22439941-22447687 Theobroma cacao
Thecc1EG029404 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22439941-22441940 Theobroma cacao
Thecc1EG029404 5.0kb upstream 5.0kb upstream 10747 true scaffold_6: 22441941-22452687 Theobroma cacao
Thecc1EG029404 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 22447688-22452687 Theobroma cacao
Thecc1EG029404 5.0kb downstream 5.0kb downstream 10747 true scaffold_6: 22436941-22447687 Theobroma cacao
Thecc1EG029404 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22436941-22441940 Theobroma cacao
Thecc1EG029404 10.0kb upstream 10.0kb upstream 15747 true scaffold_6: 22441941-22457687 Theobroma cacao
Thecc1EG029404 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 22447688-22457687 Theobroma cacao
Thecc1EG029404 10.0kb downstream 10.0kb downstream 15747 true scaffold_6: 22431941-22447687 Theobroma cacao
Thecc1EG029404 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22431941-22441940 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836481 5264 Brassicales-Malvales View MSA
124342492 5266 SBM View MSA
124245237 5268 Malvidae View MSA
124065174 5270 Rosid View MSA
123736391 5271 Pentapetalae View MSA
122785693 5272 Eudicot View MSA
122045968 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121348533 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain