Gene : Thecc1EG029338 T. cacao v1.1
Defline:  (1 of 1) PF02171//PF16488 - Piwi domain (Piwi) // Argonaute linker 2 domain (ArgoL2) Genomic Order:  1364
Name:  ? Thecc1EG029338 Secondary Identifier:  ? PAC:27438403
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029338 0.5kb upstream 0.5kb upstream 26768 true scaffold_6: 22122987-22149754 Theobroma cacao
Thecc1EG029338 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 22149255-22149754 Theobroma cacao
Thecc1EG029338 0.5kb downstream 0.5kb downstream 26768 true scaffold_6: 22122487-22149254 Theobroma cacao
Thecc1EG029338 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22122487-22122986 Theobroma cacao
Thecc1EG029338 1.0kb upstream 1.0kb upstream 27268 true scaffold_6: 22122987-22150254 Theobroma cacao
Thecc1EG029338 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 22149255-22150254 Theobroma cacao
Thecc1EG029338 1.0kb downstream 1.0kb downstream 27268 true scaffold_6: 22121987-22149254 Theobroma cacao
Thecc1EG029338 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22121987-22122986 Theobroma cacao
Thecc1EG029338 2.0kb upstream 2.0kb upstream 28268 true scaffold_6: 22122987-22151254 Theobroma cacao
Thecc1EG029338 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 22149255-22151254 Theobroma cacao
Thecc1EG029338 2.0kb downstream 2.0kb downstream 28268 true scaffold_6: 22120987-22149254 Theobroma cacao
Thecc1EG029338 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22120987-22122986 Theobroma cacao
Thecc1EG029338 5.0kb upstream 5.0kb upstream 31268 true scaffold_6: 22122987-22154254 Theobroma cacao
Thecc1EG029338 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 22149255-22154254 Theobroma cacao
Thecc1EG029338 5.0kb downstream 5.0kb downstream 31268 true scaffold_6: 22117987-22149254 Theobroma cacao
Thecc1EG029338 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22117987-22122986 Theobroma cacao
Thecc1EG029338 10.0kb upstream 10.0kb upstream 36268 true scaffold_6: 22122987-22159254 Theobroma cacao
Thecc1EG029338 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 22149255-22159254 Theobroma cacao
Thecc1EG029338 10.0kb downstream 10.0kb downstream 36268 true scaffold_6: 22112987-22149254 Theobroma cacao
Thecc1EG029338 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22112987-22122986 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029598 5273 Angiosperm View MSA
123820789 5264 Brassicales-Malvales Singleton cluster - no MSA
124316992 5266 SBM Singleton cluster - no MSA
124249222 5268 Malvidae View MSA
124039386 5270 Rosid View MSA
123742974 5271 Pentapetalae View MSA
122770466 5272 Eudicot View MSA
121350103 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain