Gene : Thecc1EG029316 T. cacao v1.1
Defline:  (1 of 1) PTHR19302//PTHR19302:SF39 - GAMMA TUBULIN COMPLEX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1346
Name:  ? Thecc1EG029316 Secondary Identifier:  ? PAC:27441031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029316 0.5kb upstream 0.5kb upstream 4533 true scaffold_6: 21972604-21977136 Theobroma cacao
Thecc1EG029316 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21976637-21977136 Theobroma cacao
Thecc1EG029316 0.5kb downstream 0.5kb downstream 4533 true scaffold_6: 21972104-21976636 Theobroma cacao
Thecc1EG029316 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21972104-21972603 Theobroma cacao
Thecc1EG029316 1.0kb upstream 1.0kb upstream 5033 true scaffold_6: 21972604-21977636 Theobroma cacao
Thecc1EG029316 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21976637-21977636 Theobroma cacao
Thecc1EG029316 1.0kb downstream 1.0kb downstream 5033 true scaffold_6: 21971604-21976636 Theobroma cacao
Thecc1EG029316 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21971604-21972603 Theobroma cacao
Thecc1EG029316 2.0kb upstream 2.0kb upstream 6033 true scaffold_6: 21972604-21978636 Theobroma cacao
Thecc1EG029316 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21976637-21978636 Theobroma cacao
Thecc1EG029316 2.0kb downstream 2.0kb downstream 6033 true scaffold_6: 21970604-21976636 Theobroma cacao
Thecc1EG029316 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21970604-21972603 Theobroma cacao
Thecc1EG029316 5.0kb upstream 5.0kb upstream 9033 true scaffold_6: 21972604-21981636 Theobroma cacao
Thecc1EG029316 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21976637-21981636 Theobroma cacao
Thecc1EG029316 5.0kb downstream 5.0kb downstream 9033 true scaffold_6: 21967604-21976636 Theobroma cacao
Thecc1EG029316 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21967604-21972603 Theobroma cacao
Thecc1EG029316 10.0kb upstream 10.0kb upstream 14033 true scaffold_6: 21972604-21986636 Theobroma cacao
Thecc1EG029316 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21976637-21986636 Theobroma cacao
Thecc1EG029316 10.0kb downstream 10.0kb downstream 14033 true scaffold_6: 21962604-21976636 Theobroma cacao
Thecc1EG029316 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21962604-21972603 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835157 5264 Brassicales-Malvales View MSA
124337071 5266 SBM View MSA
124246839 5268 Malvidae View MSA
124072224 5270 Rosid View MSA
123736953 5271 Pentapetalae View MSA
122769884 5272 Eudicot View MSA
122050156 5273 Angiosperm View MSA
121311767 5274 Embryophyte View MSA
123349020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain