Gene : Thecc1EG029266 T. cacao v1.1
Defline:  (1 of 1) PTHR21493//PTHR21493:SF131 - CGI-141-RELATED/LIPASE CONTAINING PROTEIN // ALPHA/BETA-HYDROLASES Genomic Order:  1309
Name:  ? Thecc1EG029266 Secondary Identifier:  ? PAC:27437857
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029266 0.5kb upstream 0.5kb upstream 4046 true scaffold_6: 21628785-21632830 Theobroma cacao
Thecc1EG029266 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21628785-21629284 Theobroma cacao
Thecc1EG029266 0.5kb downstream 0.5kb downstream 4046 true scaffold_6: 21629285-21633330 Theobroma cacao
Thecc1EG029266 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21632831-21633330 Theobroma cacao
Thecc1EG029266 1.0kb upstream 1.0kb upstream 4546 true scaffold_6: 21628285-21632830 Theobroma cacao
Thecc1EG029266 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21628285-21629284 Theobroma cacao
Thecc1EG029266 1.0kb downstream 1.0kb downstream 4546 true scaffold_6: 21629285-21633830 Theobroma cacao
Thecc1EG029266 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21632831-21633830 Theobroma cacao
Thecc1EG029266 2.0kb upstream 2.0kb upstream 5546 true scaffold_6: 21627285-21632830 Theobroma cacao
Thecc1EG029266 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21627285-21629284 Theobroma cacao
Thecc1EG029266 2.0kb downstream 2.0kb downstream 5546 true scaffold_6: 21629285-21634830 Theobroma cacao
Thecc1EG029266 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21632831-21634830 Theobroma cacao
Thecc1EG029266 5.0kb upstream 5.0kb upstream 8546 true scaffold_6: 21624285-21632830 Theobroma cacao
Thecc1EG029266 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21624285-21629284 Theobroma cacao
Thecc1EG029266 5.0kb downstream 5.0kb downstream 8546 true scaffold_6: 21629285-21637830 Theobroma cacao
Thecc1EG029266 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21632831-21637830 Theobroma cacao
Thecc1EG029266 10.0kb upstream 10.0kb upstream 13546 true scaffold_6: 21619285-21632830 Theobroma cacao
Thecc1EG029266 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21619285-21629284 Theobroma cacao
Thecc1EG029266 10.0kb downstream 10.0kb downstream 13546 true scaffold_6: 21629285-21642830 Theobroma cacao
Thecc1EG029266 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21632831-21642830 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829052 5264 Brassicales-Malvales View MSA
124345078 5266 SBM View MSA
124236836 5268 Malvidae View MSA
124067290 5270 Rosid View MSA
123736909 5271 Pentapetalae View MSA
122795229 5272 Eudicot View MSA
122051132 5273 Angiosperm View MSA
121349994 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain