Gene : Thecc1EG029246 T. cacao v1.1

Defline:  (1 of 12) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  1289
Name:  ? Thecc1EG029246 Secondary Identifier:  ? PAC:27438292

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029246 0.5kb upstream 0.5kb upstream 7680 true scaffold_6: 21519074-21526753 Theobroma cacao
Thecc1EG029246 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21519074-21519573 Theobroma cacao
Thecc1EG029246 0.5kb downstream 0.5kb downstream 7680 true scaffold_6: 21519574-21527253 Theobroma cacao
Thecc1EG029246 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21526754-21527253 Theobroma cacao
Thecc1EG029246 1.0kb upstream 1.0kb upstream 8180 true scaffold_6: 21518574-21526753 Theobroma cacao
Thecc1EG029246 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21518574-21519573 Theobroma cacao
Thecc1EG029246 1.0kb downstream 1.0kb downstream 8180 true scaffold_6: 21519574-21527753 Theobroma cacao
Thecc1EG029246 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21526754-21527753 Theobroma cacao
Thecc1EG029246 2.0kb upstream 2.0kb upstream 9180 true scaffold_6: 21517574-21526753 Theobroma cacao
Thecc1EG029246 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21517574-21519573 Theobroma cacao
Thecc1EG029246 2.0kb downstream 2.0kb downstream 9180 true scaffold_6: 21519574-21528753 Theobroma cacao
Thecc1EG029246 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21526754-21528753 Theobroma cacao
Thecc1EG029246 5.0kb upstream 5.0kb upstream 12180 true scaffold_6: 21514574-21526753 Theobroma cacao
Thecc1EG029246 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21514574-21519573 Theobroma cacao
Thecc1EG029246 5.0kb downstream 5.0kb downstream 12180 true scaffold_6: 21519574-21531753 Theobroma cacao
Thecc1EG029246 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21526754-21531753 Theobroma cacao
Thecc1EG029246 10.0kb upstream 10.0kb upstream 17180 true scaffold_6: 21509574-21526753 Theobroma cacao
Thecc1EG029246 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21509574-21519573 Theobroma cacao
Thecc1EG029246 10.0kb downstream 10.0kb downstream 17180 true scaffold_6: 21519574-21536753 Theobroma cacao
Thecc1EG029246 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21526754-21536753 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830210 5264 Brassicales-Malvales View MSA
124337192 5266 SBM View MSA
124244607 5268 Malvidae View MSA
124063803 5270 Rosid View MSA
123738792 5271 Pentapetalae View MSA
122797186 5272 Eudicot View MSA
122043935 5273 Angiosperm View MSA
121310211 5274 Embryophyte View MSA
123347763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain