Gene : Thecc1EG029251 T. cacao v1.1
Defline:  (1 of 2) PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATED Genomic Order:  1294
Name:  ? Thecc1EG029251 Secondary Identifier:  ? PAC:27439439
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029251 0.5kb upstream 0.5kb upstream 7602 true scaffold_6: 21545519-21553120 Theobroma cacao
Thecc1EG029251 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21552621-21553120 Theobroma cacao
Thecc1EG029251 0.5kb downstream 0.5kb downstream 7602 true scaffold_6: 21545019-21552620 Theobroma cacao
Thecc1EG029251 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21545019-21545518 Theobroma cacao
Thecc1EG029251 1.0kb upstream 1.0kb upstream 8102 true scaffold_6: 21545519-21553620 Theobroma cacao
Thecc1EG029251 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21552621-21553620 Theobroma cacao
Thecc1EG029251 1.0kb downstream 1.0kb downstream 8102 true scaffold_6: 21544519-21552620 Theobroma cacao
Thecc1EG029251 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21544519-21545518 Theobroma cacao
Thecc1EG029251 2.0kb upstream 2.0kb upstream 9102 true scaffold_6: 21545519-21554620 Theobroma cacao
Thecc1EG029251 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21552621-21554620 Theobroma cacao
Thecc1EG029251 2.0kb downstream 2.0kb downstream 9102 true scaffold_6: 21543519-21552620 Theobroma cacao
Thecc1EG029251 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21543519-21545518 Theobroma cacao
Thecc1EG029251 5.0kb upstream 5.0kb upstream 12102 true scaffold_6: 21545519-21557620 Theobroma cacao
Thecc1EG029251 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21552621-21557620 Theobroma cacao
Thecc1EG029251 5.0kb downstream 5.0kb downstream 12102 true scaffold_6: 21540519-21552620 Theobroma cacao
Thecc1EG029251 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21540519-21545518 Theobroma cacao
Thecc1EG029251 10.0kb upstream 10.0kb upstream 17102 true scaffold_6: 21545519-21562620 Theobroma cacao
Thecc1EG029251 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21552621-21562620 Theobroma cacao
Thecc1EG029251 10.0kb downstream 10.0kb downstream 17102 true scaffold_6: 21535519-21552620 Theobroma cacao
Thecc1EG029251 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21535519-21545518 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841223 5264 Brassicales-Malvales View MSA
124350468 5266 SBM View MSA
124246887 5268 Malvidae View MSA
124060766 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain