Gene : Thecc1EG029248 T. cacao v1.1
Defline:  (1 of 1) K00814 - alanine transaminase (GPT, ALT) Genomic Order:  1291
Name:  ? Thecc1EG029248 Secondary Identifier:  ? PAC:27440542
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ALANINE-DEG3-PWY Theobroma cacao pathologic  
Tcacao ALANINE-SYN2-PWY Theobroma cacao pathologic  
Tcacao PWY-7115 Theobroma cacao pathologic  
Tcacao PWY-7117 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029248 0.5kb upstream 0.5kb upstream 9104 true scaffold_6: 21532031-21541134 Theobroma cacao
Thecc1EG029248 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 21540635-21541134 Theobroma cacao
Thecc1EG029248 0.5kb downstream 0.5kb downstream 9104 true scaffold_6: 21531531-21540634 Theobroma cacao
Thecc1EG029248 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 21531531-21532030 Theobroma cacao
Thecc1EG029248 1.0kb upstream 1.0kb upstream 9604 true scaffold_6: 21532031-21541634 Theobroma cacao
Thecc1EG029248 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 21540635-21541634 Theobroma cacao
Thecc1EG029248 1.0kb downstream 1.0kb downstream 9604 true scaffold_6: 21531031-21540634 Theobroma cacao
Thecc1EG029248 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 21531031-21532030 Theobroma cacao
Thecc1EG029248 2.0kb upstream 2.0kb upstream 10604 true scaffold_6: 21532031-21542634 Theobroma cacao
Thecc1EG029248 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 21540635-21542634 Theobroma cacao
Thecc1EG029248 2.0kb downstream 2.0kb downstream 10604 true scaffold_6: 21530031-21540634 Theobroma cacao
Thecc1EG029248 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 21530031-21532030 Theobroma cacao
Thecc1EG029248 5.0kb upstream 5.0kb upstream 13604 true scaffold_6: 21532031-21545634 Theobroma cacao
Thecc1EG029248 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 21540635-21545634 Theobroma cacao
Thecc1EG029248 5.0kb downstream 5.0kb downstream 13604 true scaffold_6: 21527031-21540634 Theobroma cacao
Thecc1EG029248 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 21527031-21532030 Theobroma cacao
Thecc1EG029248 10.0kb upstream 10.0kb upstream 18604 true scaffold_6: 21532031-21550634 Theobroma cacao
Thecc1EG029248 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 21540635-21550634 Theobroma cacao
Thecc1EG029248 10.0kb downstream 10.0kb downstream 18604 true scaffold_6: 21522031-21540634 Theobroma cacao
Thecc1EG029248 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 21522031-21532030 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836852 5264 Brassicales-Malvales View MSA
124344699 5266 SBM View MSA
124251764 5268 Malvidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain