Gene : Thecc1EG029561 T. cacao v1.1
Defline:  (1 of 1) PTHR17204//PTHR17204:SF18 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // PRE-MRNA-PROCESSING FACTOR 39 Genomic Order:  1547
Name:  ? Thecc1EG029561 Secondary Identifier:  ? PAC:27440002
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029561 0.5kb upstream 0.5kb upstream 11200 true scaffold_6: 23183042-23194241 Theobroma cacao
Thecc1EG029561 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 23183042-23183541 Theobroma cacao
Thecc1EG029561 0.5kb downstream 0.5kb downstream 11200 true scaffold_6: 23183542-23194741 Theobroma cacao
Thecc1EG029561 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 23194242-23194741 Theobroma cacao
Thecc1EG029561 1.0kb upstream 1.0kb upstream 11700 true scaffold_6: 23182542-23194241 Theobroma cacao
Thecc1EG029561 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 23182542-23183541 Theobroma cacao
Thecc1EG029561 1.0kb downstream 1.0kb downstream 11700 true scaffold_6: 23183542-23195241 Theobroma cacao
Thecc1EG029561 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 23194242-23195241 Theobroma cacao
Thecc1EG029561 2.0kb upstream 2.0kb upstream 12700 true scaffold_6: 23181542-23194241 Theobroma cacao
Thecc1EG029561 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 23181542-23183541 Theobroma cacao
Thecc1EG029561 2.0kb downstream 2.0kb downstream 12700 true scaffold_6: 23183542-23196241 Theobroma cacao
Thecc1EG029561 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 23194242-23196241 Theobroma cacao
Thecc1EG029561 5.0kb upstream 5.0kb upstream 15700 true scaffold_6: 23178542-23194241 Theobroma cacao
Thecc1EG029561 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 23178542-23183541 Theobroma cacao
Thecc1EG029561 5.0kb downstream 5.0kb downstream 15700 true scaffold_6: 23183542-23199241 Theobroma cacao
Thecc1EG029561 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 23194242-23199241 Theobroma cacao
Thecc1EG029561 10.0kb upstream 10.0kb upstream 20700 true scaffold_6: 23173542-23194241 Theobroma cacao
Thecc1EG029561 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 23173542-23183541 Theobroma cacao
Thecc1EG029561 10.0kb downstream 10.0kb downstream 20700 true scaffold_6: 23183542-23204241 Theobroma cacao
Thecc1EG029561 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 23194242-23204241 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829363 5264 Brassicales-Malvales View MSA
124338828 5266 SBM View MSA
124244228 5268 Malvidae View MSA
124069199 5270 Rosid View MSA
123753236 5271 Pentapetalae View MSA
122790404 5272 Eudicot View MSA
122048891 5273 Angiosperm View MSA
121349849 5274 Embryophyte View MSA
123426942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain