Gene : Thecc1EG029531 T. cacao v1.1
Defline:  (1 of 3) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Genomic Order:  1521
Name:  ? Thecc1EG029531 Secondary Identifier:  ? PAC:27439011
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029531 0.5kb upstream 0.5kb upstream 1712 true scaffold_6: 23070143-23071854 Theobroma cacao
Thecc1EG029531 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 23071355-23071854 Theobroma cacao
Thecc1EG029531 0.5kb downstream 0.5kb downstream 1712 true scaffold_6: 23069643-23071354 Theobroma cacao
Thecc1EG029531 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 23069643-23070142 Theobroma cacao
Thecc1EG029531 1.0kb upstream 1.0kb upstream 2212 true scaffold_6: 23070143-23072354 Theobroma cacao
Thecc1EG029531 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 23071355-23072354 Theobroma cacao
Thecc1EG029531 1.0kb downstream 1.0kb downstream 2212 true scaffold_6: 23069143-23071354 Theobroma cacao
Thecc1EG029531 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 23069143-23070142 Theobroma cacao
Thecc1EG029531 2.0kb upstream 2.0kb upstream 3212 true scaffold_6: 23070143-23073354 Theobroma cacao
Thecc1EG029531 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 23071355-23073354 Theobroma cacao
Thecc1EG029531 2.0kb downstream 2.0kb downstream 3212 true scaffold_6: 23068143-23071354 Theobroma cacao
Thecc1EG029531 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 23068143-23070142 Theobroma cacao
Thecc1EG029531 5.0kb upstream 5.0kb upstream 6212 true scaffold_6: 23070143-23076354 Theobroma cacao
Thecc1EG029531 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 23071355-23076354 Theobroma cacao
Thecc1EG029531 5.0kb downstream 5.0kb downstream 6212 true scaffold_6: 23065143-23071354 Theobroma cacao
Thecc1EG029531 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 23065143-23070142 Theobroma cacao
Thecc1EG029531 10.0kb upstream 10.0kb upstream 11212 true scaffold_6: 23070143-23081354 Theobroma cacao
Thecc1EG029531 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 23071355-23081354 Theobroma cacao
Thecc1EG029531 10.0kb downstream 10.0kb downstream 11212 true scaffold_6: 23060143-23071354 Theobroma cacao
Thecc1EG029531 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 23060143-23070142 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837903 5264 Brassicales-Malvales View MSA
124347417 5266 SBM View MSA
124244902 5268 Malvidae View MSA
124072480 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain