Gene : Thecc1EG029513 T. cacao v1.1
Defline:  (1 of 1) PTHR11712//PTHR11712:SF226 - POLYKETIDE SYNTHASE-RELATED // 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC Genomic Order:  1505
Name:  ? Thecc1EG029513 Secondary Identifier:  ? PAC:27440394
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao FASYN-ELONG-PWY Theobroma cacao pathologic  
Tcacao PWY-5156 Theobroma cacao pathologic  
Tcacao PWY-5971 Theobroma cacao pathologic  
Tcacao PWY-5989 Theobroma cacao pathologic  
Tcacao PWY-6282 Theobroma cacao pathologic  
Tcacao PWY-7388 Theobroma cacao pathologic  
Tcacao PWY-7663 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029513 0.5kb upstream 0.5kb upstream 5872 true scaffold_6: 22996808-23002679 Theobroma cacao
Thecc1EG029513 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 23002180-23002679 Theobroma cacao
Thecc1EG029513 0.5kb downstream 0.5kb downstream 5872 true scaffold_6: 22996308-23002179 Theobroma cacao
Thecc1EG029513 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22996308-22996807 Theobroma cacao
Thecc1EG029513 1.0kb upstream 1.0kb upstream 6372 true scaffold_6: 22996808-23003179 Theobroma cacao
Thecc1EG029513 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 23002180-23003179 Theobroma cacao
Thecc1EG029513 1.0kb downstream 1.0kb downstream 6372 true scaffold_6: 22995808-23002179 Theobroma cacao
Thecc1EG029513 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22995808-22996807 Theobroma cacao
Thecc1EG029513 2.0kb upstream 2.0kb upstream 7372 true scaffold_6: 22996808-23004179 Theobroma cacao
Thecc1EG029513 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 23002180-23004179 Theobroma cacao
Thecc1EG029513 2.0kb downstream 2.0kb downstream 7372 true scaffold_6: 22994808-23002179 Theobroma cacao
Thecc1EG029513 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22994808-22996807 Theobroma cacao
Thecc1EG029513 5.0kb upstream 5.0kb upstream 10372 true scaffold_6: 22996808-23007179 Theobroma cacao
Thecc1EG029513 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 23002180-23007179 Theobroma cacao
Thecc1EG029513 5.0kb downstream 5.0kb downstream 10372 true scaffold_6: 22991808-23002179 Theobroma cacao
Thecc1EG029513 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22991808-22996807 Theobroma cacao
Thecc1EG029513 10.0kb upstream 10.0kb upstream 15372 true scaffold_6: 22996808-23012179 Theobroma cacao
Thecc1EG029513 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 23002180-23012179 Theobroma cacao
Thecc1EG029513 10.0kb downstream 10.0kb downstream 15372 true scaffold_6: 22986808-23002179 Theobroma cacao
Thecc1EG029513 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22986808-22996807 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833977 5264 Brassicales-Malvales View MSA
124343776 5266 SBM View MSA
124240584 5268 Malvidae View MSA
124064004 5270 Rosid View MSA
123747178 5271 Pentapetalae View MSA
122792015 5272 Eudicot View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain