Gene : Thecc1EG029518 T. cacao v1.1

Defline:  (1 of 1) PTHR11945:SF229 - F23H11.23 PROTEIN-RELATED Genomic Order:  1510
Name:  ? Thecc1EG029518 Secondary Identifier:  ? PAC:27440001

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029518 0.5kb upstream 0.5kb upstream 1724 true scaffold_6: 23022984-23024707 Theobroma cacao
Thecc1EG029518 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 23024208-23024707 Theobroma cacao
Thecc1EG029518 0.5kb downstream 0.5kb downstream 1724 true scaffold_6: 23022484-23024207 Theobroma cacao
Thecc1EG029518 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 23022484-23022983 Theobroma cacao
Thecc1EG029518 1.0kb upstream 1.0kb upstream 2224 true scaffold_6: 23022984-23025207 Theobroma cacao
Thecc1EG029518 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 23024208-23025207 Theobroma cacao
Thecc1EG029518 1.0kb downstream 1.0kb downstream 2224 true scaffold_6: 23021984-23024207 Theobroma cacao
Thecc1EG029518 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 23021984-23022983 Theobroma cacao
Thecc1EG029518 2.0kb upstream 2.0kb upstream 3224 true scaffold_6: 23022984-23026207 Theobroma cacao
Thecc1EG029518 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 23024208-23026207 Theobroma cacao
Thecc1EG029518 2.0kb downstream 2.0kb downstream 3224 true scaffold_6: 23020984-23024207 Theobroma cacao
Thecc1EG029518 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 23020984-23022983 Theobroma cacao
Thecc1EG029518 5.0kb upstream 5.0kb upstream 6224 true scaffold_6: 23022984-23029207 Theobroma cacao
Thecc1EG029518 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 23024208-23029207 Theobroma cacao
Thecc1EG029518 5.0kb downstream 5.0kb downstream 6224 true scaffold_6: 23017984-23024207 Theobroma cacao
Thecc1EG029518 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 23017984-23022983 Theobroma cacao
Thecc1EG029518 10.0kb upstream 10.0kb upstream 11224 true scaffold_6: 23022984-23034207 Theobroma cacao
Thecc1EG029518 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 23024208-23034207 Theobroma cacao
Thecc1EG029518 10.0kb downstream 10.0kb downstream 11224 true scaffold_6: 23012984-23024207 Theobroma cacao
Thecc1EG029518 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 23012984-23022983 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836412 5264 Brassicales-Malvales View MSA
124336966 5266 SBM View MSA
124242399 5268 Malvidae View MSA
124050462 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain