Gene : Thecc1EG029493 T. cacao v1.1
Defline:  (1 of 1) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  1490
Name:  ? Thecc1EG029493 Secondary Identifier:  ? PAC:27438079
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029493 0.5kb upstream 0.5kb upstream 18270 true scaffold_6: 22902905-22921174 Theobroma cacao
Thecc1EG029493 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 22920675-22921174 Theobroma cacao
Thecc1EG029493 0.5kb downstream 0.5kb downstream 18270 true scaffold_6: 22902405-22920674 Theobroma cacao
Thecc1EG029493 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22902405-22902904 Theobroma cacao
Thecc1EG029493 1.0kb upstream 1.0kb upstream 18770 true scaffold_6: 22902905-22921674 Theobroma cacao
Thecc1EG029493 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 22920675-22921674 Theobroma cacao
Thecc1EG029493 1.0kb downstream 1.0kb downstream 18770 true scaffold_6: 22901905-22920674 Theobroma cacao
Thecc1EG029493 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22901905-22902904 Theobroma cacao
Thecc1EG029493 2.0kb upstream 2.0kb upstream 19770 true scaffold_6: 22902905-22922674 Theobroma cacao
Thecc1EG029493 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 22920675-22922674 Theobroma cacao
Thecc1EG029493 2.0kb downstream 2.0kb downstream 19770 true scaffold_6: 22900905-22920674 Theobroma cacao
Thecc1EG029493 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22900905-22902904 Theobroma cacao
Thecc1EG029493 5.0kb upstream 5.0kb upstream 22770 true scaffold_6: 22902905-22925674 Theobroma cacao
Thecc1EG029493 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 22920675-22925674 Theobroma cacao
Thecc1EG029493 5.0kb downstream 5.0kb downstream 22770 true scaffold_6: 22897905-22920674 Theobroma cacao
Thecc1EG029493 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22897905-22902904 Theobroma cacao
Thecc1EG029493 10.0kb upstream 10.0kb upstream 27770 true scaffold_6: 22902905-22930674 Theobroma cacao
Thecc1EG029493 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 22920675-22930674 Theobroma cacao
Thecc1EG029493 10.0kb downstream 10.0kb downstream 27770 true scaffold_6: 22892905-22920674 Theobroma cacao
Thecc1EG029493 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22892905-22902904 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840613 5264 Brassicales-Malvales View MSA
124340494 5266 SBM View MSA
124242320 5268 Malvidae View MSA
124069116 5270 Rosid View MSA
123736390 5271 Pentapetalae View MSA
122788335 5272 Eudicot View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain