Gene : Thecc1EG029456 T. cacao v1.1
Defline:  (1 of 1) PTHR22939//PTHR22939:SF76 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 5, CHLOROPLASTIC Genomic Order:  1458
Name:  ? Thecc1EG029456 Secondary Identifier:  ? PAC:27439927
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029456 0.5kb upstream 0.5kb upstream 4675 true scaffold_6: 22688639-22693313 Theobroma cacao
Thecc1EG029456 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 22692814-22693313 Theobroma cacao
Thecc1EG029456 0.5kb downstream 0.5kb downstream 4675 true scaffold_6: 22688139-22692813 Theobroma cacao
Thecc1EG029456 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22688139-22688638 Theobroma cacao
Thecc1EG029456 1.0kb upstream 1.0kb upstream 5175 true scaffold_6: 22688639-22693813 Theobroma cacao
Thecc1EG029456 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 22692814-22693813 Theobroma cacao
Thecc1EG029456 1.0kb downstream 1.0kb downstream 5175 true scaffold_6: 22687639-22692813 Theobroma cacao
Thecc1EG029456 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22687639-22688638 Theobroma cacao
Thecc1EG029456 2.0kb upstream 2.0kb upstream 6175 true scaffold_6: 22688639-22694813 Theobroma cacao
Thecc1EG029456 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 22692814-22694813 Theobroma cacao
Thecc1EG029456 2.0kb downstream 2.0kb downstream 6175 true scaffold_6: 22686639-22692813 Theobroma cacao
Thecc1EG029456 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22686639-22688638 Theobroma cacao
Thecc1EG029456 5.0kb upstream 5.0kb upstream 9175 true scaffold_6: 22688639-22697813 Theobroma cacao
Thecc1EG029456 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 22692814-22697813 Theobroma cacao
Thecc1EG029456 5.0kb downstream 5.0kb downstream 9175 true scaffold_6: 22683639-22692813 Theobroma cacao
Thecc1EG029456 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22683639-22688638 Theobroma cacao
Thecc1EG029456 10.0kb upstream 10.0kb upstream 14175 true scaffold_6: 22688639-22702813 Theobroma cacao
Thecc1EG029456 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 22692814-22702813 Theobroma cacao
Thecc1EG029456 10.0kb downstream 10.0kb downstream 14175 true scaffold_6: 22678639-22692813 Theobroma cacao
Thecc1EG029456 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22678639-22688638 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831551 5264 Brassicales-Malvales View MSA
124346322 5266 SBM View MSA
124238394 5268 Malvidae View MSA
124050488 5270 Rosid View MSA
123749873 5271 Pentapetalae View MSA
122788077 5272 Eudicot View MSA
122044835 5273 Angiosperm View MSA
121347205 5274 Embryophyte View MSA
123425899 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain