Gene : Thecc1EG029459 T. cacao v1.1
Defline:  (1 of 2) PTHR10578//PTHR10578:SF70 - S -2-HYDROXY-ACID OXIDASE-RELATED // PEROXISOMAL (S)-2-HYDROXY-ACID OXIDASE GLO5 Genomic Order:  1461
Name:  ? Thecc1EG029459 Secondary Identifier:  ? PAC:27440525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029459 0.5kb upstream 0.5kb upstream 5661 true scaffold_6: 22714990-22720650 Theobroma cacao
Thecc1EG029459 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 22714990-22715489 Theobroma cacao
Thecc1EG029459 0.5kb downstream 0.5kb downstream 5661 true scaffold_6: 22715490-22721150 Theobroma cacao
Thecc1EG029459 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22720651-22721150 Theobroma cacao
Thecc1EG029459 1.0kb upstream 1.0kb upstream 6161 true scaffold_6: 22714490-22720650 Theobroma cacao
Thecc1EG029459 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 22714490-22715489 Theobroma cacao
Thecc1EG029459 1.0kb downstream 1.0kb downstream 6161 true scaffold_6: 22715490-22721650 Theobroma cacao
Thecc1EG029459 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22720651-22721650 Theobroma cacao
Thecc1EG029459 2.0kb upstream 2.0kb upstream 7161 true scaffold_6: 22713490-22720650 Theobroma cacao
Thecc1EG029459 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 22713490-22715489 Theobroma cacao
Thecc1EG029459 2.0kb downstream 2.0kb downstream 7161 true scaffold_6: 22715490-22722650 Theobroma cacao
Thecc1EG029459 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22720651-22722650 Theobroma cacao
Thecc1EG029459 5.0kb upstream 5.0kb upstream 10161 true scaffold_6: 22710490-22720650 Theobroma cacao
Thecc1EG029459 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 22710490-22715489 Theobroma cacao
Thecc1EG029459 5.0kb downstream 5.0kb downstream 10161 true scaffold_6: 22715490-22725650 Theobroma cacao
Thecc1EG029459 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22720651-22725650 Theobroma cacao
Thecc1EG029459 10.0kb upstream 10.0kb upstream 15161 true scaffold_6: 22705490-22720650 Theobroma cacao
Thecc1EG029459 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 22705490-22715489 Theobroma cacao
Thecc1EG029459 10.0kb downstream 10.0kb downstream 15161 true scaffold_6: 22715490-22730650 Theobroma cacao
Thecc1EG029459 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22720651-22730650 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839721 5264 Brassicales-Malvales View MSA
124322642 5266 SBM View MSA
124252128 5268 Malvidae View MSA
124071344 5270 Rosid View MSA
123746733 5271 Pentapetalae View MSA
122791103 5272 Eudicot View MSA
122046790 5273 Angiosperm View MSA
121345614 5274 Embryophyte View MSA
123426843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain