Gene : Thecc1EG029451 T. cacao v1.1
Defline:  (1 of 1) 2.6.1.13 - Ornithine aminotransferase / Ornithine--oxo-acid transaminase Genomic Order:  1454
Name:  ? Thecc1EG029451 Secondary Identifier:  ? PAC:27440867
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ARGASEDEG-PWY Theobroma cacao pathologic  
Tcacao ARGININE-SYN4-PWY Theobroma cacao pathologic  
Tcacao ARG-PRO-PWY Theobroma cacao pathologic  
Tcacao CITRULBIO-PWY Theobroma cacao pathologic  
Tcacao PWY-3341 Theobroma cacao pathologic  
Tcacao PWY-6922 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029451 0.5kb upstream 0.5kb upstream 9187 true scaffold_6: 22669462-22678648 Theobroma cacao
Thecc1EG029451 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 22678149-22678648 Theobroma cacao
Thecc1EG029451 0.5kb downstream 0.5kb downstream 9187 true scaffold_6: 22668962-22678148 Theobroma cacao
Thecc1EG029451 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 22668962-22669461 Theobroma cacao
Thecc1EG029451 1.0kb upstream 1.0kb upstream 9687 true scaffold_6: 22669462-22679148 Theobroma cacao
Thecc1EG029451 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 22678149-22679148 Theobroma cacao
Thecc1EG029451 1.0kb downstream 1.0kb downstream 9687 true scaffold_6: 22668462-22678148 Theobroma cacao
Thecc1EG029451 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 22668462-22669461 Theobroma cacao
Thecc1EG029451 2.0kb upstream 2.0kb upstream 10687 true scaffold_6: 22669462-22680148 Theobroma cacao
Thecc1EG029451 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 22678149-22680148 Theobroma cacao
Thecc1EG029451 2.0kb downstream 2.0kb downstream 10687 true scaffold_6: 22667462-22678148 Theobroma cacao
Thecc1EG029451 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 22667462-22669461 Theobroma cacao
Thecc1EG029451 5.0kb upstream 5.0kb upstream 13687 true scaffold_6: 22669462-22683148 Theobroma cacao
Thecc1EG029451 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 22678149-22683148 Theobroma cacao
Thecc1EG029451 5.0kb downstream 5.0kb downstream 13687 true scaffold_6: 22664462-22678148 Theobroma cacao
Thecc1EG029451 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 22664462-22669461 Theobroma cacao
Thecc1EG029451 10.0kb upstream 10.0kb upstream 18687 true scaffold_6: 22669462-22688148 Theobroma cacao
Thecc1EG029451 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 22678149-22688148 Theobroma cacao
Thecc1EG029451 10.0kb downstream 10.0kb downstream 18687 true scaffold_6: 22659462-22678148 Theobroma cacao
Thecc1EG029451 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 22659462-22669461 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833136 5264 Brassicales-Malvales View MSA
124343213 5266 SBM View MSA
124237215 5268 Malvidae View MSA
124066510 5270 Rosid View MSA
123747705 5271 Pentapetalae View MSA
122789437 5272 Eudicot View MSA
122044834 5273 Angiosperm View MSA
121345718 5274 Embryophyte View MSA
123423939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain