Gene : Pavir.1NG020000 P. virgatum v4.1
Defline:  (1 of 2) 5.3.1.13 - Arabinose-5-phosphate isomerase / Phosphoarabinoisomerase Genomic Order:  481
Name:  ? Pavir.1NG020000 Secondary Identifier:  ? PAC:37613387
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-1269 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG020000 0.5kb upstream 0.5kb upstream 3697 true Chr01N: 4994866-4998562 Panicum virgatum
Pavir.1NG020000 0.5kb upstream 0.5kb upstream 500 false Chr01N: 4994866-4995365 Panicum virgatum
Pavir.1NG020000 0.5kb downstream 0.5kb downstream 3697 true Chr01N: 4995366-4999062 Panicum virgatum
Pavir.1NG020000 0.5kb downstream 0.5kb downstream 500 false Chr01N: 4998563-4999062 Panicum virgatum
Pavir.1NG020000 1.0kb upstream 1.0kb upstream 4197 true Chr01N: 4994366-4998562 Panicum virgatum
Pavir.1NG020000 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 4994366-4995365 Panicum virgatum
Pavir.1NG020000 1.0kb downstream 1.0kb downstream 4197 true Chr01N: 4995366-4999562 Panicum virgatum
Pavir.1NG020000 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 4998563-4999562 Panicum virgatum
Pavir.1NG020000 2.0kb upstream 2.0kb upstream 5197 true Chr01N: 4993366-4998562 Panicum virgatum
Pavir.1NG020000 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 4993366-4995365 Panicum virgatum
Pavir.1NG020000 2.0kb downstream 2.0kb downstream 5197 true Chr01N: 4995366-5000562 Panicum virgatum
Pavir.1NG020000 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 4998563-5000562 Panicum virgatum
Pavir.1NG020000 5.0kb upstream 5.0kb upstream 8197 true Chr01N: 4990366-4998562 Panicum virgatum
Pavir.1NG020000 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 4990366-4995365 Panicum virgatum
Pavir.1NG020000 5.0kb downstream 5.0kb downstream 8197 true Chr01N: 4995366-5003562 Panicum virgatum
Pavir.1NG020000 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 4998563-5003562 Panicum virgatum
Pavir.1NG020000 10.0kb upstream 10.0kb upstream 13197 true Chr01N: 4985366-4998562 Panicum virgatum
Pavir.1NG020000 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 4985366-4995365 Panicum virgatum
Pavir.1NG020000 10.0kb downstream 10.0kb downstream 13197 true Chr01N: 4995366-5008562 Panicum virgatum
Pavir.1NG020000 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 4998563-5008562 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041154 5273 Angiosperm View MSA
122178842 5267 Panicoideae View MSA
124577036 5269 Grass View MSA
121347729 5274 Embryophyte View MSA
123423941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain