Gene : Thecc1EG029596 T. cacao v1.1
Defline:  (1 of 1) PTHR11945:SF170 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL11 Genomic Order:  1580
Name:  ? Thecc1EG029596 Secondary Identifier:  ? PAC:27437556
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029596 0.5kb upstream 0.5kb upstream 9167 true scaffold_6: 23374705-23383871 Theobroma cacao
Thecc1EG029596 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 23383372-23383871 Theobroma cacao
Thecc1EG029596 0.5kb downstream 0.5kb downstream 9167 true scaffold_6: 23374205-23383371 Theobroma cacao
Thecc1EG029596 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 23374205-23374704 Theobroma cacao
Thecc1EG029596 1.0kb upstream 1.0kb upstream 9667 true scaffold_6: 23374705-23384371 Theobroma cacao
Thecc1EG029596 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 23383372-23384371 Theobroma cacao
Thecc1EG029596 1.0kb downstream 1.0kb downstream 9667 true scaffold_6: 23373705-23383371 Theobroma cacao
Thecc1EG029596 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 23373705-23374704 Theobroma cacao
Thecc1EG029596 2.0kb upstream 2.0kb upstream 10667 true scaffold_6: 23374705-23385371 Theobroma cacao
Thecc1EG029596 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 23383372-23385371 Theobroma cacao
Thecc1EG029596 2.0kb downstream 2.0kb downstream 10667 true scaffold_6: 23372705-23383371 Theobroma cacao
Thecc1EG029596 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 23372705-23374704 Theobroma cacao
Thecc1EG029596 5.0kb upstream 5.0kb upstream 13667 true scaffold_6: 23374705-23388371 Theobroma cacao
Thecc1EG029596 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 23383372-23388371 Theobroma cacao
Thecc1EG029596 5.0kb downstream 5.0kb downstream 13667 true scaffold_6: 23369705-23383371 Theobroma cacao
Thecc1EG029596 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 23369705-23374704 Theobroma cacao
Thecc1EG029596 10.0kb upstream 10.0kb upstream 18667 true scaffold_6: 23374705-23393371 Theobroma cacao
Thecc1EG029596 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 23383372-23393371 Theobroma cacao
Thecc1EG029596 10.0kb downstream 10.0kb downstream 18667 true scaffold_6: 23364705-23383371 Theobroma cacao
Thecc1EG029596 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 23364705-23374704 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834602 5264 Brassicales-Malvales View MSA
124349939 5266 SBM View MSA
124253433 5268 Malvidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain