Gene : Thecc1EG029848 T. cacao v1.1
Defline:  (1 of 1) PTHR31614//PTHR31614:SF15 - FAMILY NOT NAMED // ARABINOGALACTAN PROTEIN 30-RELATED Genomic Order:  1812
Name:  ? Thecc1EG029848 Secondary Identifier:  ? PAC:27439271
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029848 0.5kb upstream 0.5kb upstream 2499 true scaffold_6: 24608955-24611453 Theobroma cacao
Thecc1EG029848 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24610954-24611453 Theobroma cacao
Thecc1EG029848 0.5kb downstream 0.5kb downstream 2499 true scaffold_6: 24608455-24610953 Theobroma cacao
Thecc1EG029848 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24608455-24608954 Theobroma cacao
Thecc1EG029848 1.0kb upstream 1.0kb upstream 2999 true scaffold_6: 24608955-24611953 Theobroma cacao
Thecc1EG029848 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24610954-24611953 Theobroma cacao
Thecc1EG029848 1.0kb downstream 1.0kb downstream 2999 true scaffold_6: 24607955-24610953 Theobroma cacao
Thecc1EG029848 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24607955-24608954 Theobroma cacao
Thecc1EG029848 2.0kb upstream 2.0kb upstream 3999 true scaffold_6: 24608955-24612953 Theobroma cacao
Thecc1EG029848 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24610954-24612953 Theobroma cacao
Thecc1EG029848 2.0kb downstream 2.0kb downstream 3999 true scaffold_6: 24606955-24610953 Theobroma cacao
Thecc1EG029848 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24606955-24608954 Theobroma cacao
Thecc1EG029848 5.0kb upstream 5.0kb upstream 6999 true scaffold_6: 24608955-24615953 Theobroma cacao
Thecc1EG029848 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24610954-24615953 Theobroma cacao
Thecc1EG029848 5.0kb downstream 5.0kb downstream 6999 true scaffold_6: 24603955-24610953 Theobroma cacao
Thecc1EG029848 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24603955-24608954 Theobroma cacao
Thecc1EG029848 10.0kb upstream 10.0kb upstream 11999 true scaffold_6: 24608955-24620953 Theobroma cacao
Thecc1EG029848 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24610954-24620953 Theobroma cacao
Thecc1EG029848 10.0kb downstream 10.0kb downstream 11999 true scaffold_6: 24598955-24610953 Theobroma cacao
Thecc1EG029848 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24598955-24608954 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838272 5264 Brassicales-Malvales View MSA
124322426 5266 SBM View MSA
124248065 5268 Malvidae View MSA
124066868 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain