Gene : Thecc1EG029844 T. cacao v1.1
Defline:  (1 of 1) PTHR15696:SF3 - PROTEIN SMG7L Genomic Order:  1808
Name:  ? Thecc1EG029844 Secondary Identifier:  ? PAC:27439593
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029844 0.5kb upstream 0.5kb upstream 6294 true scaffold_6: 24587635-24593928 Theobroma cacao
Thecc1EG029844 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24593429-24593928 Theobroma cacao
Thecc1EG029844 0.5kb downstream 0.5kb downstream 6294 true scaffold_6: 24587135-24593428 Theobroma cacao
Thecc1EG029844 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24587135-24587634 Theobroma cacao
Thecc1EG029844 1.0kb upstream 1.0kb upstream 6794 true scaffold_6: 24587635-24594428 Theobroma cacao
Thecc1EG029844 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24593429-24594428 Theobroma cacao
Thecc1EG029844 1.0kb downstream 1.0kb downstream 6794 true scaffold_6: 24586635-24593428 Theobroma cacao
Thecc1EG029844 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24586635-24587634 Theobroma cacao
Thecc1EG029844 2.0kb upstream 2.0kb upstream 7794 true scaffold_6: 24587635-24595428 Theobroma cacao
Thecc1EG029844 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24593429-24595428 Theobroma cacao
Thecc1EG029844 2.0kb downstream 2.0kb downstream 7794 true scaffold_6: 24585635-24593428 Theobroma cacao
Thecc1EG029844 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24585635-24587634 Theobroma cacao
Thecc1EG029844 5.0kb upstream 5.0kb upstream 10794 true scaffold_6: 24587635-24598428 Theobroma cacao
Thecc1EG029844 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24593429-24598428 Theobroma cacao
Thecc1EG029844 5.0kb downstream 5.0kb downstream 10794 true scaffold_6: 24582635-24593428 Theobroma cacao
Thecc1EG029844 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24582635-24587634 Theobroma cacao
Thecc1EG029844 10.0kb upstream 10.0kb upstream 15794 true scaffold_6: 24587635-24603428 Theobroma cacao
Thecc1EG029844 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24593429-24603428 Theobroma cacao
Thecc1EG029844 10.0kb downstream 10.0kb downstream 15794 true scaffold_6: 24577635-24593428 Theobroma cacao
Thecc1EG029844 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24577635-24587634 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833484 5264 Brassicales-Malvales View MSA
124350092 5266 SBM View MSA
124242900 5268 Malvidae View MSA
124050275 5270 Rosid View MSA
123740560 5271 Pentapetalae View MSA
122792675 5272 Eudicot View MSA
122043425 5273 Angiosperm View MSA
121310120 5274 Embryophyte View MSA
123426231 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain