Gene : Thecc1EG029854 T. cacao v1.1
Defline:  (1 of 1) PTHR31579:SF11 - EXPRESSED PROTEIN Genomic Order:  1818
Name:  ? Thecc1EG029854 Secondary Identifier:  ? PAC:27440192
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029854 0.5kb upstream 0.5kb upstream 1941 true scaffold_6: 24632468-24634408 Theobroma cacao
Thecc1EG029854 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24633909-24634408 Theobroma cacao
Thecc1EG029854 0.5kb downstream 0.5kb downstream 1941 true scaffold_6: 24631968-24633908 Theobroma cacao
Thecc1EG029854 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24631968-24632467 Theobroma cacao
Thecc1EG029854 1.0kb upstream 1.0kb upstream 2441 true scaffold_6: 24632468-24634908 Theobroma cacao
Thecc1EG029854 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24633909-24634908 Theobroma cacao
Thecc1EG029854 1.0kb downstream 1.0kb downstream 2441 true scaffold_6: 24631468-24633908 Theobroma cacao
Thecc1EG029854 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24631468-24632467 Theobroma cacao
Thecc1EG029854 2.0kb upstream 2.0kb upstream 3441 true scaffold_6: 24632468-24635908 Theobroma cacao
Thecc1EG029854 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24633909-24635908 Theobroma cacao
Thecc1EG029854 2.0kb downstream 2.0kb downstream 3441 true scaffold_6: 24630468-24633908 Theobroma cacao
Thecc1EG029854 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24630468-24632467 Theobroma cacao
Thecc1EG029854 5.0kb upstream 5.0kb upstream 6441 true scaffold_6: 24632468-24638908 Theobroma cacao
Thecc1EG029854 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24633909-24638908 Theobroma cacao
Thecc1EG029854 5.0kb downstream 5.0kb downstream 6441 true scaffold_6: 24627468-24633908 Theobroma cacao
Thecc1EG029854 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24627468-24632467 Theobroma cacao
Thecc1EG029854 10.0kb upstream 10.0kb upstream 11441 true scaffold_6: 24632468-24643908 Theobroma cacao
Thecc1EG029854 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24633909-24643908 Theobroma cacao
Thecc1EG029854 10.0kb downstream 10.0kb downstream 11441 true scaffold_6: 24622468-24633908 Theobroma cacao
Thecc1EG029854 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24622468-24632467 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825373 5264 Brassicales-Malvales View MSA
124349163 5266 SBM View MSA
124246421 5268 Malvidae View MSA
124071276 5270 Rosid View MSA
123751272 5271 Pentapetalae View MSA
122785688 5272 Eudicot View MSA
122045708 5273 Angiosperm View MSA
123429021 5275 Viridiplantae View MSA
121310489 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain