Gene : Thecc1EG029832 T. cacao v1.1
Defline:  (1 of 17) PF03110 - SBP domain (SBP) Genomic Order:  1796
Name:  ? Thecc1EG029832 Secondary Identifier:  ? PAC:27439934
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029832 0.5kb upstream 0.5kb upstream 3675 true scaffold_6: 24527373-24531047 Theobroma cacao
Thecc1EG029832 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24530548-24531047 Theobroma cacao
Thecc1EG029832 0.5kb downstream 0.5kb downstream 3675 true scaffold_6: 24526873-24530547 Theobroma cacao
Thecc1EG029832 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24526873-24527372 Theobroma cacao
Thecc1EG029832 1.0kb upstream 1.0kb upstream 4175 true scaffold_6: 24527373-24531547 Theobroma cacao
Thecc1EG029832 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24530548-24531547 Theobroma cacao
Thecc1EG029832 1.0kb downstream 1.0kb downstream 4175 true scaffold_6: 24526373-24530547 Theobroma cacao
Thecc1EG029832 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24526373-24527372 Theobroma cacao
Thecc1EG029832 2.0kb upstream 2.0kb upstream 5175 true scaffold_6: 24527373-24532547 Theobroma cacao
Thecc1EG029832 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24530548-24532547 Theobroma cacao
Thecc1EG029832 2.0kb downstream 2.0kb downstream 5175 true scaffold_6: 24525373-24530547 Theobroma cacao
Thecc1EG029832 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24525373-24527372 Theobroma cacao
Thecc1EG029832 5.0kb upstream 5.0kb upstream 8175 true scaffold_6: 24527373-24535547 Theobroma cacao
Thecc1EG029832 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24530548-24535547 Theobroma cacao
Thecc1EG029832 5.0kb downstream 5.0kb downstream 8175 true scaffold_6: 24522373-24530547 Theobroma cacao
Thecc1EG029832 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24522373-24527372 Theobroma cacao
Thecc1EG029832 10.0kb upstream 10.0kb upstream 13175 true scaffold_6: 24527373-24540547 Theobroma cacao
Thecc1EG029832 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24530548-24540547 Theobroma cacao
Thecc1EG029832 10.0kb downstream 10.0kb downstream 13175 true scaffold_6: 24517373-24530547 Theobroma cacao
Thecc1EG029832 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24517373-24527372 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827867 5264 Brassicales-Malvales View MSA
124344103 5266 SBM View MSA
124243691 5268 Malvidae View MSA
124068768 5270 Rosid View MSA
123745338 5271 Pentapetalae View MSA
122797834 5272 Eudicot View MSA
122050798 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351345 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain