Gene : Thecc1EG029842 T. cacao v1.1
Defline:  (1 of 1) PTHR22847//PTHR22847:SF429//PTHR22847:SF473 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED Genomic Order:  1806
Name:  ? Thecc1EG029842 Secondary Identifier:  ? PAC:27437579
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029842 0.5kb upstream 0.5kb upstream 8565 true scaffold_6: 24577289-24585853 Theobroma cacao
Thecc1EG029842 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24585354-24585853 Theobroma cacao
Thecc1EG029842 0.5kb downstream 0.5kb downstream 8565 true scaffold_6: 24576789-24585353 Theobroma cacao
Thecc1EG029842 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24576789-24577288 Theobroma cacao
Thecc1EG029842 1.0kb upstream 1.0kb upstream 9065 true scaffold_6: 24577289-24586353 Theobroma cacao
Thecc1EG029842 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24585354-24586353 Theobroma cacao
Thecc1EG029842 1.0kb downstream 1.0kb downstream 9065 true scaffold_6: 24576289-24585353 Theobroma cacao
Thecc1EG029842 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24576289-24577288 Theobroma cacao
Thecc1EG029842 2.0kb upstream 2.0kb upstream 10065 true scaffold_6: 24577289-24587353 Theobroma cacao
Thecc1EG029842 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24585354-24587353 Theobroma cacao
Thecc1EG029842 2.0kb downstream 2.0kb downstream 10065 true scaffold_6: 24575289-24585353 Theobroma cacao
Thecc1EG029842 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24575289-24577288 Theobroma cacao
Thecc1EG029842 5.0kb upstream 5.0kb upstream 13065 true scaffold_6: 24577289-24590353 Theobroma cacao
Thecc1EG029842 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24585354-24590353 Theobroma cacao
Thecc1EG029842 5.0kb downstream 5.0kb downstream 13065 true scaffold_6: 24572289-24585353 Theobroma cacao
Thecc1EG029842 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24572289-24577288 Theobroma cacao
Thecc1EG029842 10.0kb upstream 10.0kb upstream 18065 true scaffold_6: 24577289-24595353 Theobroma cacao
Thecc1EG029842 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24585354-24595353 Theobroma cacao
Thecc1EG029842 10.0kb downstream 10.0kb downstream 18065 true scaffold_6: 24567289-24585353 Theobroma cacao
Thecc1EG029842 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24567289-24577288 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827058 5264 Brassicales-Malvales View MSA
124321288 5266 SBM View MSA
124248375 5268 Malvidae View MSA
124072313 5270 Rosid View MSA
123751820 5271 Pentapetalae View MSA
122789823 5272 Eudicot View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain