Gene : Thecc1EG029839 T. cacao v1.1
Defline:  (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) Genomic Order:  1803
Name:  ? Thecc1EG029839 Secondary Identifier:  ? PAC:27438379
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029839 0.5kb upstream 0.5kb upstream 2956 true scaffold_6: 24566433-24569388 Theobroma cacao
Thecc1EG029839 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24566433-24566932 Theobroma cacao
Thecc1EG029839 0.5kb downstream 0.5kb downstream 2956 true scaffold_6: 24566933-24569888 Theobroma cacao
Thecc1EG029839 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24569389-24569888 Theobroma cacao
Thecc1EG029839 1.0kb upstream 1.0kb upstream 3456 true scaffold_6: 24565933-24569388 Theobroma cacao
Thecc1EG029839 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24565933-24566932 Theobroma cacao
Thecc1EG029839 1.0kb downstream 1.0kb downstream 3456 true scaffold_6: 24566933-24570388 Theobroma cacao
Thecc1EG029839 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24569389-24570388 Theobroma cacao
Thecc1EG029839 2.0kb upstream 2.0kb upstream 4456 true scaffold_6: 24564933-24569388 Theobroma cacao
Thecc1EG029839 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24564933-24566932 Theobroma cacao
Thecc1EG029839 2.0kb downstream 2.0kb downstream 4456 true scaffold_6: 24566933-24571388 Theobroma cacao
Thecc1EG029839 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24569389-24571388 Theobroma cacao
Thecc1EG029839 5.0kb upstream 5.0kb upstream 7456 true scaffold_6: 24561933-24569388 Theobroma cacao
Thecc1EG029839 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24561933-24566932 Theobroma cacao
Thecc1EG029839 5.0kb downstream 5.0kb downstream 7456 true scaffold_6: 24566933-24574388 Theobroma cacao
Thecc1EG029839 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24569389-24574388 Theobroma cacao
Thecc1EG029839 10.0kb upstream 10.0kb upstream 12456 true scaffold_6: 24556933-24569388 Theobroma cacao
Thecc1EG029839 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24556933-24566932 Theobroma cacao
Thecc1EG029839 10.0kb downstream 10.0kb downstream 12456 true scaffold_6: 24566933-24579388 Theobroma cacao
Thecc1EG029839 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24569389-24579388 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834765 5264 Brassicales-Malvales View MSA
124338196 5266 SBM View MSA
124253299 5268 Malvidae View MSA
124064887 5270 Rosid View MSA
123746932 5271 Pentapetalae View MSA
122792808 5272 Eudicot View MSA
122046027 5273 Angiosperm View MSA
121345659 5274 Embryophyte View MSA
123426333 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain