Gene : Thecc1EG029813 T. cacao v1.1
Defline:  (1 of 5) PTHR32099//PTHR32099:SF4 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN // CYSTEINE-RICH REPEAT SECRETORY PROTEIN 1-RELATED Genomic Order:  1777
Name:  ? Thecc1EG029813 Secondary Identifier:  ? PAC:27437992
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029813 0.5kb upstream 0.5kb upstream 2996 true scaffold_6: 24447171-24450166 Theobroma cacao
Thecc1EG029813 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24447171-24447670 Theobroma cacao
Thecc1EG029813 0.5kb downstream 0.5kb downstream 2996 true scaffold_6: 24447671-24450666 Theobroma cacao
Thecc1EG029813 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24450167-24450666 Theobroma cacao
Thecc1EG029813 1.0kb upstream 1.0kb upstream 3496 true scaffold_6: 24446671-24450166 Theobroma cacao
Thecc1EG029813 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24446671-24447670 Theobroma cacao
Thecc1EG029813 1.0kb downstream 1.0kb downstream 3496 true scaffold_6: 24447671-24451166 Theobroma cacao
Thecc1EG029813 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24450167-24451166 Theobroma cacao
Thecc1EG029813 2.0kb upstream 2.0kb upstream 4496 true scaffold_6: 24445671-24450166 Theobroma cacao
Thecc1EG029813 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24445671-24447670 Theobroma cacao
Thecc1EG029813 2.0kb downstream 2.0kb downstream 4496 true scaffold_6: 24447671-24452166 Theobroma cacao
Thecc1EG029813 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24450167-24452166 Theobroma cacao
Thecc1EG029813 5.0kb upstream 5.0kb upstream 7496 true scaffold_6: 24442671-24450166 Theobroma cacao
Thecc1EG029813 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24442671-24447670 Theobroma cacao
Thecc1EG029813 5.0kb downstream 5.0kb downstream 7496 true scaffold_6: 24447671-24455166 Theobroma cacao
Thecc1EG029813 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24450167-24455166 Theobroma cacao
Thecc1EG029813 10.0kb upstream 10.0kb upstream 12496 true scaffold_6: 24437671-24450166 Theobroma cacao
Thecc1EG029813 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24437671-24447670 Theobroma cacao
Thecc1EG029813 10.0kb downstream 10.0kb downstream 12496 true scaffold_6: 24447671-24460166 Theobroma cacao
Thecc1EG029813 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24450167-24460166 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841485 5264 Brassicales-Malvales View MSA
124348242 5266 SBM View MSA
124252331 5268 Malvidae View MSA
124074309 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain