Gene : Pavir.1NG042600 P. virgatum v4.1
Defline:  (1 of 1) K01703 - 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit (leuC) Genomic Order:  263
Name:  ? Pavir.1NG042600 Secondary Identifier:  ? PAC:37612113
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum BRANCHED-CHAIN-AA-SYN-PWY Panicum virgatum pathologic  
Pvirgatum LEUSYN-PWY Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG042600 0.5kb upstream 0.5kb upstream 5155 true Chr01N: 2899218-2904372 Panicum virgatum
Pavir.1NG042600 0.5kb upstream 0.5kb upstream 500 false Chr01N: 2903873-2904372 Panicum virgatum
Pavir.1NG042600 0.5kb downstream 0.5kb downstream 5155 true Chr01N: 2898718-2903872 Panicum virgatum
Pavir.1NG042600 0.5kb downstream 0.5kb downstream 500 false Chr01N: 2898718-2899217 Panicum virgatum
Pavir.1NG042600 1.0kb upstream 1.0kb upstream 5655 true Chr01N: 2899218-2904872 Panicum virgatum
Pavir.1NG042600 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 2903873-2904872 Panicum virgatum
Pavir.1NG042600 1.0kb downstream 1.0kb downstream 5655 true Chr01N: 2898218-2903872 Panicum virgatum
Pavir.1NG042600 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 2898218-2899217 Panicum virgatum
Pavir.1NG042600 2.0kb upstream 2.0kb upstream 6655 true Chr01N: 2899218-2905872 Panicum virgatum
Pavir.1NG042600 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 2903873-2905872 Panicum virgatum
Pavir.1NG042600 2.0kb downstream 2.0kb downstream 6655 true Chr01N: 2897218-2903872 Panicum virgatum
Pavir.1NG042600 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 2897218-2899217 Panicum virgatum
Pavir.1NG042600 5.0kb upstream 5.0kb upstream 9655 true Chr01N: 2899218-2908872 Panicum virgatum
Pavir.1NG042600 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 2903873-2908872 Panicum virgatum
Pavir.1NG042600 5.0kb downstream 5.0kb downstream 9655 true Chr01N: 2894218-2903872 Panicum virgatum
Pavir.1NG042600 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 2894218-2899217 Panicum virgatum
Pavir.1NG042600 10.0kb upstream 10.0kb upstream 14655 true Chr01N: 2899218-2913872 Panicum virgatum
Pavir.1NG042600 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 2903873-2913872 Panicum virgatum
Pavir.1NG042600 10.0kb downstream 10.0kb downstream 14655 true Chr01N: 2889218-2903872 Panicum virgatum
Pavir.1NG042600 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 2889218-2899217 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186218 5267 Panicoideae View MSA
124568502 5269 Grass View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain